Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.83■□□□□ 0.45
LYSMD2Q8IV50 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD2Q8IV50 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 Z92544.1-202ENST00000571933 1220 ntBASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
LYSMD2Q8IV50 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 AP000997.3-201ENST00000623333 2250 ntBASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 AC079598.2-202ENST00000546624 1451 ntBASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD2Q8IV50 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 MTDHP2-201ENST00000601468 714 ntBASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AC012354.3-201ENST00000623734 483 ntBASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AC241377.3-202ENST00000626088 1088 ntBASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AC241585.3-202ENST00000628937 1088 ntBASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AC245100.8-202ENST00000629247 1058 ntBASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 AC068587.7-201ENST00000641602 218 ntBASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms