Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PACS2Q86VP3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.33■□□□□ 0.85
PACS2Q86VP3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PACS2Q86VP3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PACS2Q86VP3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.33■□□□□ 0.85
PACS2Q86VP3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PACS2Q86VP3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.33■□□□□ 0.85
PACS2Q86VP3 AL499627.2-201ENST00000606283 725 ntBASIC20.33■□□□□ 0.85
PACS2Q86VP3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.33■□□□□ 0.85
PACS2Q86VP3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PACS2Q86VP3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PACS2Q86VP3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PACS2Q86VP3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.33■□□□□ 0.84
PACS2Q86VP3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PACS2Q86VP3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PACS2Q86VP3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.33■□□□□ 0.84
PACS2Q86VP3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PACS2Q86VP3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PACS2Q86VP3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PACS2Q86VP3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.33■□□□□ 0.84
PACS2Q86VP3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
PACS2Q86VP3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 AC133637.1-201ENST00000624115 1537 ntBASIC20.32■□□□□ 0.84
PACS2Q86VP3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PACS2Q86VP3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PACS2Q86VP3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PACS2Q86VP3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.31■□□□□ 0.84
PACS2Q86VP3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PACS2Q86VP3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.31■□□□□ 0.84
PACS2Q86VP3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS2Q86VP3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
PACS2Q86VP3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS2Q86VP3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PACS2Q86VP3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 SUDS3P1-201ENST00000505831 966 ntBASIC20.29■□□□□ 0.84
PACS2Q86VP3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 AC104564.3-201ENST00000582367 638 ntBASIC20.29■□□□□ 0.84
PACS2Q86VP3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 AL031432.3-201ENST00000607698 485 ntBASIC20.29■□□□□ 0.84
PACS2Q86VP3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 AC012313.1-201ENST00000593393 3059 ntBASIC20.29■□□□□ 0.84
PACS2Q86VP3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms