Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SHFQ7M4L6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHFQ7M4L6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SHFQ7M4L6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHFQ7M4L6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.32■□□□□ 0.52
SHFQ7M4L6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SHFQ7M4L6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHFQ7M4L6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHFQ7M4L6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHFQ7M4L6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHFQ7M4L6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHFQ7M4L6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHFQ7M4L6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 AL158211.5-201ENST00000623583 2518 ntBASIC18.31■□□□□ 0.52
SHFQ7M4L6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHFQ7M4L6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHFQ7M4L6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.31■□□□□ 0.52
SHFQ7M4L6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.3■□□□□ 0.52
SHFQ7M4L6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.3■□□□□ 0.52
SHFQ7M4L6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.3■□□□□ 0.52
SHFQ7M4L6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.3■□□□□ 0.52
SHFQ7M4L6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SHFQ7M4L6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.3■□□□□ 0.52
SHFQ7M4L6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHFQ7M4L6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 AC079140.4-201ENST00000507448 529 ntBASIC18.29■□□□□ 0.52
SHFQ7M4L6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 AC142381.2-201ENST00000566120 298 ntBASIC18.29■□□□□ 0.52
SHFQ7M4L6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 AC125437.2-201ENST00000625180 2167 ntBASIC18.29■□□□□ 0.52
SHFQ7M4L6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.29■□□□□ 0.52
SHFQ7M4L6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHFQ7M4L6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 AL020996.1-203ENST00000536896 2307 ntBASIC18.28■□□□□ 0.52
SHFQ7M4L6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
SHFQ7M4L6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.28■□□□□ 0.52
SHFQ7M4L6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SHFQ7M4L6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SHFQ7M4L6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHFQ7M4L6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHFQ7M4L6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms