Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 AL162377.1-201ENST00000618844 1793 ntBASIC20.35■□□□□ 0.85
RAPH1Q70E73 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 AC116050.2-201ENST00000612102 1779 ntBASIC20.34■□□□□ 0.85
RAPH1Q70E73 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPH1Q70E73 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPH1Q70E73 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPH1Q70E73 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPH1Q70E73 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.33■□□□□ 0.85
RAPH1Q70E73 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPH1Q70E73 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPH1Q70E73 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.33■□□□□ 0.85
RAPH1Q70E73 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPH1Q70E73 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RAPH1Q70E73 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.33■□□□□ 0.85
RAPH1Q70E73 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAPH1Q70E73 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.33■□□□□ 0.85
RAPH1Q70E73 AP001160.3-201ENST00000601484 763 ntBASIC20.33■□□□□ 0.85
RAPH1Q70E73 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.33■□□□□ 0.84
RAPH1Q70E73 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RAPH1Q70E73 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAPH1Q70E73 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
RAPH1Q70E73 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.32■□□□□ 0.84
RAPH1Q70E73 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPH1Q70E73 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 AC099778.1-201ENST00000568593 1911 ntBASIC20.31■□□□□ 0.84
RAPH1Q70E73 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPH1Q70E73 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAPH1Q70E73 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms