Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 AL356740.2-201ENST00000601559 647 ntBASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 AL139246.5-201ENST00000606645 996 ntBASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 AC026471.6-201ENST00000622954 1905 ntBASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDPF1Q6NVV7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 PLK5-205ENST00000642079 1969 ntBASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 AL138781.2-201ENST00000617896 1843 ntBASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDPF1Q6NVV7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDPF1Q6NVV7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms