Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 MIR6786-201ENST00000616843 113 ntBASIC25.82■■□□□ 1.72
RC3H1Q5TC82 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
RC3H1Q5TC82 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 AC079598.2-202ENST00000546624 1451 ntBASIC25.81■■□□□ 1.72
RC3H1Q5TC82 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 AL590326.2-201ENST00000625139 305 ntBASIC25.81■■□□□ 1.72
RC3H1Q5TC82 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RC3H1Q5TC82 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 AC124283.5-201ENST00000624661 1809 ntBASIC25.8■■□□□ 1.72
RC3H1Q5TC82 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 AC005363.2-201ENST00000618631 242 ntBASIC25.8■■□□□ 1.72
RC3H1Q5TC82 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 AC011484.1-201ENST00000377652 1995 ntBASIC25.8■■□□□ 1.72
RC3H1Q5TC82 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RC3H1Q5TC82 KRT8P9-201ENST00000558927 1449 ntBASIC25.8■■□□□ 1.72
RC3H1Q5TC82 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 ARMC10P1-201ENST00000313754 855 ntBASIC25.79■■□□□ 1.72
RC3H1Q5TC82 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 AL049597.2-201ENST00000565575 961 ntBASIC25.79■■□□□ 1.72
RC3H1Q5TC82 REXO1L10P-201ENST00000615707 1290 ntBASIC25.79■■□□□ 1.72
RC3H1Q5TC82 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
RC3H1Q5TC82 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RC3H1Q5TC82 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 AC242852.2-201ENST00000615738 1807 ntBASIC25.77■■□□□ 1.72
RC3H1Q5TC82 UNC93B2-201ENST00000285383 730 ntBASIC25.77■■□□□ 1.72
RC3H1Q5TC82 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 AL121906.2-201ENST00000621597 723 ntBASIC25.77■■□□□ 1.72
RC3H1Q5TC82 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RC3H1Q5TC82 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
RC3H1Q5TC82 C9orf163-202ENST00000624034 2573 ntBASIC25.76■■□□□ 1.71
RC3H1Q5TC82 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.76■■□□□ 1.71
RC3H1Q5TC82 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.76■■□□□ 1.71
RC3H1Q5TC82 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RC3H1Q5TC82 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RC3H1Q5TC82 KRT8P36-201ENST00000489121 1440 ntBASIC25.76■■□□□ 1.71
RC3H1Q5TC82 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RC3H1Q5TC82 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms