Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KRT18P68-201ENST00000392293 1000 ntBASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 AC006970.2-201ENST00000450065 779 ntBASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 AF201337.1-201ENST00000520239 748 ntBASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 AC105036.2-201ENST00000569468 176 ntBASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 AL162377.1-201ENST00000618844 1793 ntBASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 AC105020.6-201ENST00000621523 1217 ntBASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN20Q4JDL3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 KRT17P1-201ENST00000399211 1546 ntBASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 AC073130.3-201ENST00000624389 2278 ntBASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN20Q4JDL3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN20Q4JDL3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN20Q4JDL3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN20Q4JDL3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 SMG8-203ENST00000578922 2178 ntBASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 MKRN4P-201ENST00000444706 1521 ntBASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.38■■□□□ 1.01
PTPN20Q4JDL3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms