Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.41■□□□□ 0.38
CDNFQ49AH0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDNFQ49AH0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDNFQ49AH0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDNFQ49AH0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
CDNFQ49AH0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.41■□□□□ 0.38
CDNFQ49AH0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.41■□□□□ 0.38
CDNFQ49AH0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.41■□□□□ 0.38
CDNFQ49AH0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDNFQ49AH0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDNFQ49AH0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDNFQ49AH0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 AC131281.2-201ENST00000520478 145 ntBASIC17.4■□□□□ 0.38
CDNFQ49AH0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 AC053503.5-201ENST00000601508 636 ntBASIC17.4■□□□□ 0.38
CDNFQ49AH0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDNFQ49AH0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.4■□□□□ 0.38
CDNFQ49AH0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CDNFQ49AH0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 EEF1DP3-203ENST00000566025 782 ntBASIC17.39■□□□□ 0.37
CDNFQ49AH0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDNFQ49AH0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
CDNFQ49AH0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 UNC93B3-201ENST00000308076 687 ntBASIC17.38■□□□□ 0.37
CDNFQ49AH0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.38■□□□□ 0.37
CDNFQ49AH0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDNFQ49AH0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
CDNFQ49AH0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDNFQ49AH0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDNFQ49AH0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.37■□□□□ 0.37
CDNFQ49AH0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.37■□□□□ 0.37
CDNFQ49AH0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.37■□□□□ 0.37
CDNFQ49AH0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDNFQ49AH0 AC116562.4-201ENST00000641316 2276 ntBASIC17.37■□□□□ 0.37
CDNFQ49AH0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms