Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.1■■□□□ 1.29
LONRF3Q496Y0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 AC116050.2-201ENST00000612102 1779 ntBASIC23.09■■□□□ 1.29
LONRF3Q496Y0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 CNN2P6-201ENST00000439038 900 ntBASIC23.09■■□□□ 1.29
LONRF3Q496Y0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 AC010536.3-201ENST00000620306 533 ntBASIC23.09■■□□□ 1.29
LONRF3Q496Y0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LONRF3Q496Y0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 KRT18P20-201ENST00000548986 1279 ntBASIC23.08■■□□□ 1.29
LONRF3Q496Y0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 AL121832.2-201ENST00000610979 668 ntBASIC23.08■■□□□ 1.29
LONRF3Q496Y0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LONRF3Q496Y0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.08■■□□□ 1.28
LONRF3Q496Y0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
LONRF3Q496Y0 AFG3L1P-217ENST00000557444 2447 ntBASIC23.08■■□□□ 1.28
LONRF3Q496Y0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
LONRF3Q496Y0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 AC099778.1-201ENST00000568593 1911 ntBASIC23.07■■□□□ 1.28
LONRF3Q496Y0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
LONRF3Q496Y0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.06■■□□□ 1.28
LONRF3Q496Y0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.06■■□□□ 1.28
LONRF3Q496Y0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 MIR2861-201ENST00000636310 90 ntBASIC23.05■■□□□ 1.28
LONRF3Q496Y0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LONRF3Q496Y0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 AC092720.2-201ENST00000602388 1665 ntBASIC23.04■■□□□ 1.28
LONRF3Q496Y0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LONRF3Q496Y0 AC091799.1-201ENST00000422823 811 ntBASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms