Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 SMD1YGR074W 441 nt1.82□□□□□ -2.12
DDC1Q08949 BIG1YHR101C 1008 nt1.82□□□□□ -2.12
DDC1Q08949 RPI1YIL119C 1224 nt1.82□□□□□ -2.12
DDC1Q08949 YLR031WYLR031W 561 nt1.82□□□□□ -2.12
DDC1Q08949 GRX8YLR364W 330 nt1.82□□□□□ -2.12
DDC1Q08949 VPH1YOR270C 2523 nt1.82□□□□□ -2.12
DDC1Q08949 RUD3YOR216C 1455 nt1.82□□□□□ -2.12
DDC1Q08949 CDC60YPL160W 3273 nt1.81□□□□□ -2.12
DDC1Q08949 VPS34YLR240W 2628 nt1.81□□□□□ -2.12
DDC1Q08949 RPC10YHR143W-A 213 nt1.81□□□□□ -2.12
DDC1Q08949 YJL007CYJL007C 315 nt1.81□□□□□ -2.12
DDC1Q08949 YJR140W-AYJR140W-A 150 nt1.81□□□□□ -2.12
DDC1Q08949 YOR333CYOR333C 417 nt1.81□□□□□ -2.12
DDC1Q08949 YPL205CYPL205C 345 nt1.81□□□□□ -2.12
DDC1Q08949 snR41snR41 95 nt1.81□□□□□ -2.12
DDC1Q08949 MGA2YIR033W 3342 nt1.81□□□□□ -2.12
DDC1Q08949 RTT107YHR154W 3213 nt1.81□□□□□ -2.12
DDC1Q08949 YDL068WYDL068W 330 nt1.8□□□□□ -2.12
DDC1Q08949 YDR194W-AYDR194W-A 153 nt1.8□□□□□ -2.12
DDC1Q08949 MZM1YDR493W 372 nt1.8□□□□□ -2.12
DDC1Q08949 NUP82YJL061W 2142 nt1.8□□□□□ -2.12
DDC1Q08949 RPA34YJL148W 702 nt1.8□□□□□ -2.12
DDC1Q08949 NCE101YJL205C 162 nt1.8□□□□□ -2.12
DDC1Q08949 YML108WYML108W 318 nt1.8□□□□□ -2.12
DDC1Q08949 YNL010WYNL010W 726 nt1.8□□□□□ -2.12
DDC1Q08949 ROX1YPR065W 1107 nt1.8□□□□□ -2.12
DDC1Q08949 LRE1YCL051W 1752 nt1.8□□□□□ -2.12
DDC1Q08949 RTT101YJL047C 2529 nt1.79□□□□□ -2.12
DDC1Q08949 ANS1YHR126C 480 nt1.79□□□□□ -2.12
DDC1Q08949 YLR269CYLR269C 351 nt1.79□□□□□ -2.12
DDC1Q08949 MNE1YOR350C 1992 nt1.79□□□□□ -2.12
DDC1Q08949 TRL1YJL087C 2484 nt1.79□□□□□ -2.12
DDC1Q08949 CFT2YLR115W 2580 nt1.79□□□□□ -2.12
DDC1Q08949 SPO22YIL073C 2928 nt1.79□□□□□ -2.12
DDC1Q08949 TUS1YLR425W 3924 nt1.78□□□□□ -2.12
DDC1Q08949 YNL144CYNL144C 2223 nt1.78□□□□□ -2.12
DDC1Q08949 VOA1YGR106C 798 nt1.78□□□□□ -2.12
DDC1Q08949 tT(UGU)HtT(UGU)H 72 nt1.78□□□□□ -2.12
DDC1Q08949 IRC19YLL033W 693 nt1.78□□□□□ -2.12
DDC1Q08949 YBR076C-AYBR076C-A 267 nt1.78□□□□□ -2.12
DDC1Q08949 YPR177CYPR177C 372 nt1.78□□□□□ -2.12
DDC1Q08949 MYO2YOR326W 4725 nt1.78□□□□□ -2.13
DDC1Q08949 SPC72YAL047C 1869 nt1.77□□□□□ -2.13
DDC1Q08949 VPS8YAL002W 3825 nt1.77□□□□□ -2.13
DDC1Q08949 YKL111CYKL111C 336 nt1.77□□□□□ -2.13
DDC1Q08949 YKR075W-AYKR075W-A 270 nt1.77□□□□□ -2.13
DDC1Q08949 YMR052C-AYMR052C-A 366 nt1.77□□□□□ -2.13
DDC1Q08949 SEN15YMR059W 387 nt1.77□□□□□ -2.13
DDC1Q08949 YOR248WYOR248W 303 nt1.77□□□□□ -2.13
DDC1Q08949 UBR2YLR024C 5619 nt1.76□□□□□ -2.13
DDC1Q08949 YHR139C-AYHR139C-A 312 nt1.76□□□□□ -2.13
DDC1Q08949 TEN1YLR010C 483 nt1.76□□□□□ -2.13
DDC1Q08949 YLR053CYLR053C 327 nt1.76□□□□□ -2.13
DDC1Q08949 CDC33YOL139C 642 nt1.76□□□□□ -2.13
DDC1Q08949 GDS1YOR355W 1569 nt1.76□□□□□ -2.13
DDC1Q08949 CRM1YGR218W 3255 nt1.76□□□□□ -2.13
DDC1Q08949 VPS35YJL154C 2835 nt1.75□□□□□ -2.13
DDC1Q08949 YDR286CYDR286C 345 nt1.75□□□□□ -2.13
DDC1Q08949 YER188C-AYER188C-A 300 nt1.75□□□□□ -2.13
DDC1Q08949 HOP2YGL033W 657 nt1.75□□□□□ -2.13
DDC1Q08949 ECL1YGR146C 636 nt1.75□□□□□ -2.13
DDC1Q08949 tT(UGU)Q1tT(UGU)Q1 76 nt1.75□□□□□ -2.13
DDC1Q08949 COA6YMR244C-A 315 nt1.75□□□□□ -2.13
DDC1Q08949 COX7YMR256C 183 nt1.75□□□□□ -2.13
DDC1Q08949 CMC2YBL059C-A 330 nt1.75□□□□□ -2.13
DDC1Q08949 YJR098CYJR098C 1971 nt1.74□□□□□ -2.13
DDC1Q08949 VPS52YDR484W 1926 nt1.74□□□□□ -2.13
DDC1Q08949 YBR012W-AYBR012W-A 1323 nt1.74□□□□□ -2.13
DDC1Q08949 YOR142W-AYOR142W-A 1323 nt1.74□□□□□ -2.13
DDC1Q08949 YPR158W-AYPR158W-A 1323 nt1.74□□□□□ -2.13
DDC1Q08949 YLR264C-AYLR264C-A 117 nt1.74□□□□□ -2.13
DDC1Q08949 TIF11YMR260C 462 nt1.74□□□□□ -2.13
DDC1Q08949 YMR324CYMR324C 243 nt1.74□□□□□ -2.13
DDC1Q08949 SLM6YBR266C 453 nt1.74□□□□□ -2.13
DDC1Q08949 snR54snR54 86 nt1.74□□□□□ -2.13
DDC1Q08949 CFT1YDR301W 4074 nt1.74□□□□□ -2.13
DDC1Q08949 SOK2YMR016C 2358 nt1.74□□□□□ -2.13
DDC1Q08949 NUP120YKL057C 3114 nt1.74□□□□□ -2.13
DDC1Q08949 UTP21YLR409C 2820 nt1.73□□□□□ -2.13
DDC1Q08949 PPN1YDR452W 2025 nt1.73□□□□□ -2.13
DDC1Q08949 IRC10YOL015W 1761 nt1.73□□□□□ -2.13
DDC1Q08949 TRM3YDL112W 4311 nt1.73□□□□□ -2.13
DDC1Q08949 HMLALPHA2YCL067C 633 nt1.73□□□□□ -2.13
DDC1Q08949 MATALPHA2YCR039C 633 nt1.73□□□□□ -2.13
DDC1Q08949 YDL041WYDL041W 354 nt1.73□□□□□ -2.13
DDC1Q08949 YGR025WYGR025W 303 nt1.73□□□□□ -2.13
DDC1Q08949 YGR042WYGR042W 816 nt1.73□□□□□ -2.13
DDC1Q08949 YHR125WYHR125W 306 nt1.73□□□□□ -2.13
DDC1Q08949 YLR101CYLR101C 396 nt1.73□□□□□ -2.13
DDC1Q08949 SNC2YOR327C 348 nt1.73□□□□□ -2.13
DDC1Q08949 RTC6YPL183W-A 282 nt1.73□□□□□ -2.13
DDC1Q08949 TSC3YBR058C-A 243 nt1.73□□□□□ -2.13
DDC1Q08949 YPR039WYPR039W 336 nt1.73□□□□□ -2.13
DDC1Q08949 MMS22YLR320W 4365 nt1.73□□□□□ -2.13
DDC1Q08949 SWT1YOR166C 1377 nt1.72□□□□□ -2.13
DDC1Q08949 LHS1YKL073W 2646 nt1.72□□□□□ -2.13
DDC1Q08949 FIG2YCR089W 4830 nt1.72□□□□□ -2.13
DDC1Q08949 NBL1YHR199C-A 222 nt1.72□□□□□ -2.13
DDC1Q08949 CRG1YHR209W 876 nt1.72□□□□□ -2.13
DDC1Q08949 YMR153C-AYMR153C-A 336 nt1.72□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms