Protein–RNA interactions for Protein: Q01064

PDE1B, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, humanhuman

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1BQ01064 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDE1BQ01064 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE1BQ01064 AC006015.1-201ENST00000429970 570 ntBASIC20.71■□□□□ 0.91
PDE1BQ01064 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1BQ01064 IKBKGP1-201ENST00000612193 1073 ntBASIC20.71■□□□□ 0.91
PDE1BQ01064 AC010536.3-201ENST00000620306 533 ntBASIC20.71■□□□□ 0.91
PDE1BQ01064 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.71■□□□□ 0.91
PDE1BQ01064 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1BQ01064 AC027702.1-201ENST00000563810 1770 ntBASIC20.71■□□□□ 0.91
PDE1BQ01064 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1BQ01064 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PDE1BQ01064 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PDE1BQ01064 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDE1BQ01064 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.71■□□□□ 0.91
PDE1BQ01064 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.91
PDE1BQ01064 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
PDE1BQ01064 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PDE1BQ01064 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.7■□□□□ 0.9
PDE1BQ01064 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDE1BQ01064 TERF1P5-201ENST00000477545 1207 ntBASIC20.7■□□□□ 0.9
PDE1BQ01064 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE1BQ01064 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.7■□□□□ 0.9
PDE1BQ01064 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.7■□□□□ 0.9
PDE1BQ01064 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDE1BQ01064 AC007952.6-201ENST00000573168 2673 ntBASIC20.7■□□□□ 0.9
PDE1BQ01064 AC003957.1-201ENST00000625108 2673 ntBASIC20.7■□□□□ 0.9
PDE1BQ01064 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE1BQ01064 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 FP700111.2-201ENST00000619190 1892 ntBASIC20.69■□□□□ 0.9
PDE1BQ01064 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE1BQ01064 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
PDE1BQ01064 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE1BQ01064 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE1BQ01064 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 AL391422.3-201ENST00000603791 2761 ntBASIC20.69■□□□□ 0.9
PDE1BQ01064 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDE1BQ01064 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDE1BQ01064 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PDE1BQ01064 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE1BQ01064 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE1BQ01064 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE1BQ01064 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDE1BQ01064 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PDE1BQ01064 AC091799.1-201ENST00000422823 811 ntBASIC20.68■□□□□ 0.9
PDE1BQ01064 CDV3P1-201ENST00000471403 739 ntBASIC20.68■□□□□ 0.9
PDE1BQ01064 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE1BQ01064 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.68■□□□□ 0.9
PDE1BQ01064 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDE1BQ01064 AC020907.5-201ENST00000624372 1936 ntBASIC20.68■□□□□ 0.9
PDE1BQ01064 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
PDE1BQ01064 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
PDE1BQ01064 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE1BQ01064 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1BQ01064 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDE1BQ01064 PCDHAC2-203ENST00000615316 3011 ntBASIC20.67■□□□□ 0.9
PDE1BQ01064 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1BQ01064 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PDE1BQ01064 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.67■□□□□ 0.9
PDE1BQ01064 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.67■□□□□ 0.9
PDE1BQ01064 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.67■□□□□ 0.9
PDE1BQ01064 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
PDE1BQ01064 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PDE1BQ01064 AC013268.1-206ENST00000638368 961 ntBASIC20.67■□□□□ 0.9
PDE1BQ01064 AC112229.1-201ENST00000639295 961 ntBASIC20.67■□□□□ 0.9
PDE1BQ01064 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PDE1BQ01064 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1BQ01064 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1BQ01064 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1BQ01064 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE1BQ01064 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PDE1BQ01064 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE1BQ01064 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms