Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
TRA2BP62995 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.19■□□□□ 0.66
TRA2BP62995 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.19■□□□□ 0.66
TRA2BP62995 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.19■□□□□ 0.66
TRA2BP62995 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.19■□□□□ 0.66
TRA2BP62995 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.19■□□□□ 0.66
TRA2BP62995 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.19■□□□□ 0.66
TRA2BP62995 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.19■□□□□ 0.66
TRA2BP62995 AC080038.1-201ENST00000611274 1154 ntBASIC19.19■□□□□ 0.66
TRA2BP62995 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.19■□□□□ 0.66
TRA2BP62995 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.19■□□□□ 0.66
TRA2BP62995 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TRA2BP62995 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.19■□□□□ 0.66
TRA2BP62995 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRA2BP62995 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRA2BP62995 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
TRA2BP62995 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 KRT18P68-201ENST00000392293 1000 ntBASIC19.18■□□□□ 0.66
TRA2BP62995 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.18■□□□□ 0.66
TRA2BP62995 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.18■□□□□ 0.66
TRA2BP62995 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.18■□□□□ 0.66
TRA2BP62995 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 CYP2T3P-201ENST00000601990 817 ntBASIC19.18■□□□□ 0.66
TRA2BP62995 AC005181.1-201ENST00000604782 1256 ntBASIC19.18■□□□□ 0.66
TRA2BP62995 AL137784.2-201ENST00000607332 1000 ntBASIC19.18■□□□□ 0.66
TRA2BP62995 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.18■□□□□ 0.66
TRA2BP62995 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRA2BP62995 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRA2BP62995 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.18■□□□□ 0.66
TRA2BP62995 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.17■□□□□ 0.66
TRA2BP62995 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRA2BP62995 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 AC073130.3-201ENST00000624389 2278 ntBASIC19.17■□□□□ 0.66
TRA2BP62995 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRA2BP62995 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRA2BP62995 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.17■□□□□ 0.66
TRA2BP62995 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.17■□□□□ 0.66
TRA2BP62995 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
TRA2BP62995 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRA2BP62995 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.17■□□□□ 0.66
TRA2BP62995 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
TRA2BP62995 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.16■□□□□ 0.66
TRA2BP62995 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.16■□□□□ 0.66
TRA2BP62995 AC004911.1-201ENST00000416316 871 ntBASIC19.16■□□□□ 0.66
TRA2BP62995 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TRA2BP62995 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.16■□□□□ 0.66
TRA2BP62995 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRA2BP62995 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
TRA2BP62995 IKBKGP1-201ENST00000612193 1073 ntBASIC19.16■□□□□ 0.66
TRA2BP62995 AC105020.6-201ENST00000621523 1217 ntBASIC19.16■□□□□ 0.66
TRA2BP62995 DPP3P2-201ENST00000416030 1696 ntBASIC19.16■□□□□ 0.66
TRA2BP62995 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TRA2BP62995 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.16■□□□□ 0.66
TRA2BP62995 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.16■□□□□ 0.66
TRA2BP62995 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRA2BP62995 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.16■□□□□ 0.66
TRA2BP62995 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRA2BP62995 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRA2BP62995 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRA2BP62995 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms