Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN6P56747 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN6P56747 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN6P56747 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN6P56747 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN6P56747 KRT18P35-201ENST00000510488 1269 ntBASIC19.58■□□□□ 0.72
CLDN6P56747 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN6P56747 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN6P56747 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN6P56747 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN6P56747 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN6P56747 AL135905.2-201ENST00000584934 1404 ntBASIC19.58■□□□□ 0.72
CLDN6P56747 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN6P56747 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN6P56747 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN6P56747 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
CLDN6P56747 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
CLDN6P56747 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CLDN6P56747 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 RARRES2P10-201ENST00000564312 460 ntBASIC19.57■□□□□ 0.72
CLDN6P56747 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLDN6P56747 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLDN6P56747 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN6P56747 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN6P56747 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CLDN6P56747 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLDN6P56747 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLDN6P56747 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.56■□□□□ 0.72
CLDN6P56747 AC026471.5-201ENST00000615068 467 ntBASIC19.56■□□□□ 0.72
CLDN6P56747 AC127496.7-201ENST00000625110 1798 ntBASIC19.56■□□□□ 0.72
CLDN6P56747 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLDN6P56747 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN6P56747 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN6P56747 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN6P56747 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLDN6P56747 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN6P56747 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLDN6P56747 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN6P56747 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLDN6P56747 AP003071.4-201ENST00000562276 1284 ntBASIC19.55■□□□□ 0.72
CLDN6P56747 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN6P56747 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN6P56747 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.55■□□□□ 0.72
CLDN6P56747 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN6P56747 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLDN6P56747 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN6P56747 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 AC124283.5-201ENST00000624661 1809 ntBASIC19.54■□□□□ 0.72
CLDN6P56747 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN6P56747 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.54■□□□□ 0.72
CLDN6P56747 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.54■□□□□ 0.72
CLDN6P56747 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
CLDN6P56747 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.54■□□□□ 0.72
CLDN6P56747 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN6P56747 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN6P56747 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms