Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
WNT3AP56704 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
WNT3AP56704 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.55■□□□□ 0.88
WNT3AP56704 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
WNT3AP56704 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.55■□□□□ 0.88
WNT3AP56704 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.55■□□□□ 0.88
WNT3AP56704 AC093787.1-201ENST00000450396 207 ntBASIC20.55■□□□□ 0.88
WNT3AP56704 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.55■□□□□ 0.88
WNT3AP56704 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.55■□□□□ 0.88
WNT3AP56704 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.55■□□□□ 0.88
WNT3AP56704 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.55■□□□□ 0.88
WNT3AP56704 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
WNT3AP56704 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
WNT3AP56704 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
WNT3AP56704 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
WNT3AP56704 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.54■□□□□ 0.88
WNT3AP56704 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.54■□□□□ 0.88
WNT3AP56704 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.54■□□□□ 0.88
WNT3AP56704 MIR663A-201ENST00000385250 93 ntBASIC20.54■□□□□ 0.88
WNT3AP56704 CROCCP5-201ENST00000436658 830 ntBASIC20.54■□□□□ 0.88
WNT3AP56704 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.54■□□□□ 0.88
WNT3AP56704 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.54■□□□□ 0.88
WNT3AP56704 AL512408.1-201ENST00000569378 2000 ntBASIC20.54■□□□□ 0.88
WNT3AP56704 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.54■□□□□ 0.88
WNT3AP56704 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
WNT3AP56704 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 AC010980.2-201ENST00000587099 1412 ntBASIC20.53■□□□□ 0.88
WNT3AP56704 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
WNT3AP56704 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.53■□□□□ 0.88
WNT3AP56704 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.53■□□□□ 0.88
WNT3AP56704 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 AL355472.2-201ENST00000422958 438 ntBASIC20.53■□□□□ 0.88
WNT3AP56704 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.53■□□□□ 0.88
WNT3AP56704 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 AC133552.2-202ENST00000575694 574 ntBASIC20.53■□□□□ 0.88
WNT3AP56704 CYP2T3P-201ENST00000601990 817 ntBASIC20.53■□□□□ 0.88
WNT3AP56704 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.53■□□□□ 0.88
WNT3AP56704 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
WNT3AP56704 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.53■□□□□ 0.88
WNT3AP56704 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
WNT3AP56704 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
WNT3AP56704 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.53■□□□□ 0.88
WNT3AP56704 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.53■□□□□ 0.88
WNT3AP56704 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3AP56704 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3AP56704 AL162377.1-201ENST00000618844 1793 ntBASIC20.52■□□□□ 0.88
WNT3AP56704 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.52■□□□□ 0.88
WNT3AP56704 KRT18P68-201ENST00000392293 1000 ntBASIC20.52■□□□□ 0.88
WNT3AP56704 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
WNT3AP56704 AL512625.2-201ENST00000417533 625 ntBASIC20.52■□□□□ 0.88
WNT3AP56704 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3AP56704 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3AP56704 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
WNT3AP56704 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
WNT3AP56704 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
WNT3AP56704 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
WNT3AP56704 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
WNT3AP56704 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
WNT3AP56704 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.52■□□□□ 0.87
WNT3AP56704 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
WNT3AP56704 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
WNT3AP56704 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
WNT3AP56704 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
WNT3AP56704 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.51■□□□□ 0.87
WNT3AP56704 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
WNT3AP56704 AC073130.3-201ENST00000624389 2278 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms