Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
AP1S2P56377 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
AP1S2P56377 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AP1S2P56377 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 AC004911.1-201ENST00000416316 871 ntBASIC19.78■□□□□ 0.76
AP1S2P56377 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.78■□□□□ 0.76
AP1S2P56377 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.78■□□□□ 0.76
AP1S2P56377 AC073111.5-205ENST00000641717 521 ntBASIC19.78■□□□□ 0.76
AP1S2P56377 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
AP1S2P56377 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP1S2P56377 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP1S2P56377 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.78■□□□□ 0.76
AP1S2P56377 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.78■□□□□ 0.76
AP1S2P56377 AL162377.1-201ENST00000618844 1793 ntBASIC19.78■□□□□ 0.76
AP1S2P56377 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP1S2P56377 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S2P56377 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
AP1S2P56377 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S2P56377 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.77■□□□□ 0.76
AP1S2P56377 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 AC005181.1-201ENST00000604782 1256 ntBASIC19.77■□□□□ 0.76
AP1S2P56377 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.77■□□□□ 0.76
AP1S2P56377 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
AP1S2P56377 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP1S2P56377 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP1S2P56377 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
AP1S2P56377 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
AP1S2P56377 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.76■□□□□ 0.75
AP1S2P56377 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
AP1S2P56377 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.76■□□□□ 0.75
AP1S2P56377 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.76■□□□□ 0.75
AP1S2P56377 AL512625.2-201ENST00000417533 625 ntBASIC19.76■□□□□ 0.75
AP1S2P56377 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.76■□□□□ 0.75
AP1S2P56377 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AP1S2P56377 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.76■□□□□ 0.75
AP1S2P56377 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP1S2P56377 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S2P56377 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
AP1S2P56377 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
AP1S2P56377 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S2P56377 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.75■□□□□ 0.75
AP1S2P56377 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S2P56377 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S2P56377 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.75■□□□□ 0.75
AP1S2P56377 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.75■□□□□ 0.75
AP1S2P56377 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
AP1S2P56377 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP1S2P56377 AL512408.1-201ENST00000569378 2000 ntBASIC19.75■□□□□ 0.75
AP1S2P56377 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.74■□□□□ 0.75
AP1S2P56377 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.74■□□□□ 0.75
AP1S2P56377 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP1S2P56377 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms