Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SH3BGRP55822 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3BGRP55822 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3BGRP55822 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SH3BGRP55822 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3BGRP55822 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3BGRP55822 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3BGRP55822 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SH3BGRP55822 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SH3BGRP55822 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SH3BGRP55822 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.28■□□□□ 0.68
SH3BGRP55822 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 AC099791.1-201ENST00000416440 715 ntBASIC19.28■□□□□ 0.68
SH3BGRP55822 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3BGRP55822 AL136967.2-201ENST00000623968 743 ntBASIC19.28■□□□□ 0.68
SH3BGRP55822 AL031602.1-201ENST00000633169 911 ntBASIC19.28■□□□□ 0.68
SH3BGRP55822 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3BGRP55822 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3BGRP55822 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SH3BGRP55822 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3BGRP55822 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3BGRP55822 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3BGRP55822 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3BGRP55822 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3BGRP55822 AL049796.1-201ENST00000565336 1766 ntBASIC19.27■□□□□ 0.68
SH3BGRP55822 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3BGRP55822 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3BGRP55822 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3BGRP55822 AC126544.1-201ENST00000580842 1059 ntBASIC19.27■□□□□ 0.68
SH3BGRP55822 AC010525.1-201ENST00000585559 441 ntBASIC19.27■□□□□ 0.68
SH3BGRP55822 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3BGRP55822 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SH3BGRP55822 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3BGRP55822 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SH3BGRP55822 AC079598.2-202ENST00000546624 1451 ntBASIC19.27■□□□□ 0.67
SH3BGRP55822 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SH3BGRP55822 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SH3BGRP55822 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SH3BGRP55822 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.27■□□□□ 0.67
SH3BGRP55822 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SH3BGRP55822 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3BGRP55822 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3BGRP55822 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
SH3BGRP55822 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3BGRP55822 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3BGRP55822 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3BGRP55822 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3BGRP55822 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3BGRP55822 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3BGRP55822 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SH3BGRP55822 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3BGRP55822 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3BGRP55822 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SH3BGRP55822 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.25■□□□□ 0.67
SH3BGRP55822 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3BGRP55822 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SH3BGRP55822 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 LINC01960-201ENST00000563759 1884 ntBASIC19.25■□□□□ 0.67
SH3BGRP55822 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SH3BGRP55822 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH3BGRP55822 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms