Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDH8P55286 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH8P55286 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH8P55286 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH8P55286 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CDH8P55286 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH8P55286 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDH8P55286 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDH8P55286 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH8P55286 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH8P55286 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDH8P55286 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH8P55286 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 AC073314.1-201ENST00000568729 2216 ntBASIC21.7■■□□□ 1.06
CDH8P55286 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH8P55286 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH8P55286 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH8P55286 AL157384.1-201ENST00000445995 2473 ntBASIC21.69■■□□□ 1.06
CDH8P55286 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH8P55286 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH8P55286 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 C2orf69P4-201ENST00000565394 541 ntBASIC21.69■■□□□ 1.06
CDH8P55286 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH8P55286 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH8P55286 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CDH8P55286 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH8P55286 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CDH8P55286 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH8P55286 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDH8P55286 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH8P55286 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH8P55286 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH8P55286 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDH8P55286 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH8P55286 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH8P55286 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH8P55286 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH8P55286 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
CDH8P55286 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH8P55286 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH8P55286 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH8P55286 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH8P55286 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CDH8P55286 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH8P55286 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH8P55286 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH8P55286 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH8P55286 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH8P55286 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH8P55286 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH8P55286 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDH8P55286 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.66■■□□□ 1.06
CDH8P55286 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH8P55286 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH8P55286 FEM1AP1-201ENST00000431297 1995 ntBASIC21.66■■□□□ 1.06
CDH8P55286 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH8P55286 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH8P55286 AC092667.1-201ENST00000434301 2586 ntBASIC21.65■■□□□ 1.06
CDH8P55286 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH8P55286 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH8P55286 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH8P55286 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH8P55286 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH8P55286 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.65■■□□□ 1.06
CDH8P55286 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH8P55286 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDH8P55286 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms