Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.31■■□□□ 1.32
LBX1P52954 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.31■■□□□ 1.32
LBX1P52954 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LBX1P52954 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LBX1P52954 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.3■■□□□ 1.32
LBX1P52954 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
LBX1P52954 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.3■■□□□ 1.32
LBX1P52954 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LBX1P52954 TSPY21P-201ENST00000433481 731 ntBASIC23.3■■□□□ 1.32
LBX1P52954 TSPY23P-201ENST00000440136 739 ntBASIC23.3■■□□□ 1.32
LBX1P52954 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.3■■□□□ 1.32
LBX1P52954 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LBX1P52954 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.3■■□□□ 1.32
LBX1P52954 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.3■■□□□ 1.32
LBX1P52954 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.3■■□□□ 1.32
LBX1P52954 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LBX1P52954 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
LBX1P52954 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LBX1P52954 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.3■■□□□ 1.32
LBX1P52954 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.29■■□□□ 1.32
LBX1P52954 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LBX1P52954 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LBX1P52954 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LBX1P52954 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LBX1P52954 KRT8P10-201ENST00000450021 1447 ntBASIC23.29■■□□□ 1.32
LBX1P52954 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.29■■□□□ 1.32
LBX1P52954 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
LBX1P52954 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LBX1P52954 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
LBX1P52954 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.28■■□□□ 1.32
LBX1P52954 HMGA1P5-201ENST00000412453 271 ntBASIC23.28■■□□□ 1.32
LBX1P52954 COX11P1-201ENST00000489116 835 ntBASIC23.28■■□□□ 1.32
LBX1P52954 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.28■■□□□ 1.32
LBX1P52954 SLC25A1P4-201ENST00000567977 778 ntBASIC23.28■■□□□ 1.32
LBX1P52954 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.28■■□□□ 1.32
LBX1P52954 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.28■■□□□ 1.32
LBX1P52954 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 AC004812.2-201ENST00000611079 2094 ntBASIC23.28■■□□□ 1.32
LBX1P52954 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LBX1P52954 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LBX1P52954 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.27■■□□□ 1.32
LBX1P52954 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LBX1P52954 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.27■■□□□ 1.32
LBX1P52954 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.27■■□□□ 1.32
LBX1P52954 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.27■■□□□ 1.32
LBX1P52954 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.27■■□□□ 1.32
LBX1P52954 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.27■■□□□ 1.32
LBX1P52954 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LBX1P52954 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LBX1P52954 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LBX1P52954 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LBX1P52954 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
LBX1P52954 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LBX1P52954 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
LBX1P52954 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LBX1P52954 AL845331.1-201ENST00000424978 1190 ntBASIC23.26■■□□□ 1.31
LBX1P52954 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.26■■□□□ 1.31
LBX1P52954 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.26■■□□□ 1.31
LBX1P52954 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LBX1P52954 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
LBX1P52954 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LBX1P52954 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LBX1P52954 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.25■■□□□ 1.31
LBX1P52954 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.25■■□□□ 1.31
LBX1P52954 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
LBX1P52954 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LBX1P52954 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LBX1P52954 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.25■■□□□ 1.31
LBX1P52954 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.25■■□□□ 1.31
LBX1P52954 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
LBX1P52954 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.25■■□□□ 1.31
LBX1P52954 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.25■■□□□ 1.31
LBX1P52954 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.25■■□□□ 1.31
LBX1P52954 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.25■■□□□ 1.31
LBX1P52954 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LBX1P52954 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.25■■□□□ 1.31
LBX1P52954 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.25■■□□□ 1.31
LBX1P52954 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LBX1P52954 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
LBX1P52954 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LBX1P52954 AC116050.2-201ENST00000612102 1779 ntBASIC23.24■■□□□ 1.31
LBX1P52954 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
LBX1P52954 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.24■■□□□ 1.31
LBX1P52954 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
LBX1P52954 AL022342.1-201ENST00000400363 863 ntBASIC23.24■■□□□ 1.31
LBX1P52954 MESTP1-201ENST00000404287 994 ntBASIC23.24■■□□□ 1.31
LBX1P52954 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LBX1P52954 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.24■■□□□ 1.31
LBX1P52954 AL671277.2-201ENST00000458060 996 ntBASIC23.24■■□□□ 1.31
LBX1P52954 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.24■■□□□ 1.31
LBX1P52954 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms