Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCR9P51686 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.86■□□□□ 0.45
CCR9P51686 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCR9P51686 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.86■□□□□ 0.45
CCR9P51686 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCR9P51686 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCR9P51686 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.86■□□□□ 0.45
CCR9P51686 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.86■□□□□ 0.45
CCR9P51686 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCR9P51686 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCR9P51686 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCR9P51686 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 AC010141.2-201ENST00000452426 721 ntBASIC17.85■□□□□ 0.45
CCR9P51686 SUDS3P1-201ENST00000505831 966 ntBASIC17.85■□□□□ 0.45
CCR9P51686 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.85■□□□□ 0.45
CCR9P51686 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCR9P51686 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCR9P51686 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCR9P51686 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.84■□□□□ 0.45
CCR9P51686 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.84■□□□□ 0.45
CCR9P51686 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CCR9P51686 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.84■□□□□ 0.45
CCR9P51686 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCR9P51686 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCR9P51686 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.84■□□□□ 0.45
CCR9P51686 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCR9P51686 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.84■□□□□ 0.45
CCR9P51686 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCR9P51686 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCR9P51686 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCR9P51686 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCR9P51686 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCR9P51686 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCR9P51686 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCR9P51686 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.83■□□□□ 0.44
CCR9P51686 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.83■□□□□ 0.44
CCR9P51686 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.83■□□□□ 0.44
CCR9P51686 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.83■□□□□ 0.44
CCR9P51686 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.83■□□□□ 0.44
CCR9P51686 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCR9P51686 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCR9P51686 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCR9P51686 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCR9P51686 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.83■□□□□ 0.44
CCR9P51686 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCR9P51686 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.82■□□□□ 0.44
CCR9P51686 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.82■□□□□ 0.44
CCR9P51686 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCR9P51686 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.82■□□□□ 0.44
CCR9P51686 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.82■□□□□ 0.44
CCR9P51686 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.82■□□□□ 0.44
CCR9P51686 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.82■□□□□ 0.44
CCR9P51686 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCR9P51686 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCR9P51686 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCR9P51686 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCR9P51686 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CCR9P51686 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCR9P51686 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCR9P51686 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCR9P51686 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.81■□□□□ 0.44
CCR9P51686 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCR9P51686 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCR9P51686 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCR9P51686 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCR9P51686 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCR9P51686 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms