Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP9P49458 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SRP9P49458 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.96■□□□□ 0.47
SRP9P49458 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.96■□□□□ 0.47
SRP9P49458 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.96■□□□□ 0.47
SRP9P49458 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.96■□□□□ 0.47
SRP9P49458 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.96■□□□□ 0.47
SRP9P49458 EEF1DP3-203ENST00000566025 782 ntBASIC17.96■□□□□ 0.47
SRP9P49458 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.96■□□□□ 0.47
SRP9P49458 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.96■□□□□ 0.47
SRP9P49458 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.96■□□□□ 0.47
SRP9P49458 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.96■□□□□ 0.47
SRP9P49458 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SRP9P49458 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP9P49458 AC018445.3-201ENST00000624177 1945 ntBASIC17.96■□□□□ 0.47
SRP9P49458 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
SRP9P49458 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 AP004607.4-201ENST00000530158 1459 ntBASIC17.95■□□□□ 0.46
SRP9P49458 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SRP9P49458 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SRP9P49458 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SRP9P49458 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.95■□□□□ 0.46
SRP9P49458 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 AL162430.1-201ENST00000480705 870 ntBASIC17.95■□□□□ 0.46
SRP9P49458 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.95■□□□□ 0.46
SRP9P49458 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.95■□□□□ 0.46
SRP9P49458 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.95■□□□□ 0.46
SRP9P49458 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 AC004854.2-201ENST00000608450 1441 ntBASIC17.95■□□□□ 0.46
SRP9P49458 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SRP9P49458 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.95■□□□□ 0.46
SRP9P49458 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP9P49458 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SRP9P49458 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
SRP9P49458 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP9P49458 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP9P49458 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP9P49458 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP9P49458 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SRP9P49458 KRT18P5-201ENST00000436075 1291 ntBASIC17.94■□□□□ 0.46
SRP9P49458 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP9P49458 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP9P49458 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SRP9P49458 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP9P49458 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP9P49458 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP9P49458 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP9P49458 AL512408.1-201ENST00000569378 2000 ntBASIC17.94■□□□□ 0.46
SRP9P49458 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP9P49458 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SRP9P49458 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.94■□□□□ 0.46
SRP9P49458 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP9P49458 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP9P49458 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SRP9P49458 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SRP9P49458 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
SRP9P49458 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP9P49458 AC104187.1-201ENST00000607510 612 ntBASIC17.93■□□□□ 0.46
SRP9P49458 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 AC008175.2-201ENST00000612840 297 ntBASIC17.93■□□□□ 0.46
SRP9P49458 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.93■□□□□ 0.46
SRP9P49458 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP9P49458 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP9P49458 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP9P49458 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SRP9P49458 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms