Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1DP48730 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1DP48730 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 AC092720.2-201ENST00000602388 1665 ntBASIC20.42■□□□□ 0.86
CSNK1DP48730 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.42■□□□□ 0.86
CSNK1DP48730 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1DP48730 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.42■□□□□ 0.86
CSNK1DP48730 AC023632.3-201ENST00000521633 145 ntBASIC20.42■□□□□ 0.86
CSNK1DP48730 CD99P1-205ENST00000527459 561 ntBASIC20.42■□□□□ 0.86
CSNK1DP48730 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1DP48730 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.42■□□□□ 0.86
CSNK1DP48730 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1DP48730 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1DP48730 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1DP48730 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1DP48730 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1DP48730 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.41■□□□□ 0.86
CSNK1DP48730 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1DP48730 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.41■□□□□ 0.86
CSNK1DP48730 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.41■□□□□ 0.86
CSNK1DP48730 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSNK1DP48730 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.4■□□□□ 0.86
CSNK1DP48730 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1DP48730 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1DP48730 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1DP48730 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.4■□□□□ 0.86
CSNK1DP48730 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1DP48730 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSNK1DP48730 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.4■□□□□ 0.86
CSNK1DP48730 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.4■□□□□ 0.86
CSNK1DP48730 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CSNK1DP48730 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1DP48730 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1DP48730 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
CSNK1DP48730 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1DP48730 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
CSNK1DP48730 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSNK1DP48730 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CSNK1DP48730 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.39■□□□□ 0.85
CSNK1DP48730 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.39■□□□□ 0.85
CSNK1DP48730 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.39■□□□□ 0.85
CSNK1DP48730 RNA5SP413-201ENST00000516373 109 ntBASIC20.39■□□□□ 0.85
CSNK1DP48730 PNMA6B-201ENST00000538162 1200 ntBASIC20.39■□□□□ 0.85
CSNK1DP48730 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.39■□□□□ 0.85
CSNK1DP48730 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.39■□□□□ 0.85
CSNK1DP48730 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.39■□□□□ 0.85
CSNK1DP48730 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSNK1DP48730 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.38■□□□□ 0.85
CSNK1DP48730 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 PTBP1P-201ENST00000554374 1601 ntBASIC20.38■□□□□ 0.85
CSNK1DP48730 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.38■□□□□ 0.85
CSNK1DP48730 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.38■□□□□ 0.85
CSNK1DP48730 AC092368.3-202ENST00000574180 1591 ntBASIC20.38■□□□□ 0.85
CSNK1DP48730 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CSNK1DP48730 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 UNC93B5-201ENST00000530315 699 ntBASIC20.38■□□□□ 0.85
CSNK1DP48730 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.38■□□□□ 0.85
CSNK1DP48730 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSNK1DP48730 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1DP48730 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1DP48730 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1DP48730 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1DP48730 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1DP48730 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSNK1DP48730 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms