Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLC6A9P48067 AP005212.1-201ENST00000581547 1997 ntBASIC17.91■□□□□ 0.46
SLC6A9P48067 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC6A9P48067 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC6A9P48067 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC6A9P48067 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SLC6A9P48067 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC6A9P48067 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC6A9P48067 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A9P48067 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC6A9P48067 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SLC6A9P48067 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A9P48067 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SLC6A9P48067 AC027702.1-201ENST00000563810 1770 ntBASIC17.9■□□□□ 0.46
SLC6A9P48067 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC6A9P48067 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC6A9P48067 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A9P48067 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC6A9P48067 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A9P48067 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC6A9P48067 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC6A9P48067 IKBKGP1-201ENST00000612193 1073 ntBASIC17.9■□□□□ 0.46
SLC6A9P48067 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A9P48067 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A9P48067 GABARAPL3-202ENST00000624044 1851 ntBASIC17.9■□□□□ 0.46
SLC6A9P48067 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC6A9P48067 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.89■□□□□ 0.46
SLC6A9P48067 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.89■□□□□ 0.46
SLC6A9P48067 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A9P48067 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A9P48067 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A9P48067 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A9P48067 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC6A9P48067 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A9P48067 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 SLC7A5P1-201ENST00000568957 537 ntBASIC17.89■□□□□ 0.45
SLC6A9P48067 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A9P48067 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 KRT18P61-201ENST00000585825 1298 ntBASIC17.89■□□□□ 0.45
SLC6A9P48067 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC6A9P48067 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A9P48067 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A9P48067 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A9P48067 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A9P48067 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A9P48067 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC6A9P48067 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
SLC6A9P48067 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SLC6A9P48067 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC6A9P48067 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 MYCNOS-205ENST00000641950 531 ntBASIC17.88■□□□□ 0.45
SLC6A9P48067 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 RBM17P2-201ENST00000616397 1405 ntBASIC17.88■□□□□ 0.45
SLC6A9P48067 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A9P48067 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A9P48067 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC6A9P48067 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC6A9P48067 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC6A9P48067 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A9P48067 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms