Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDF5P43026 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GDF5P43026 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDF5P43026 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GDF5P43026 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GDF5P43026 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GDF5P43026 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 SMG8-203ENST00000578922 2178 ntBASIC19.78■□□□□ 0.76
GDF5P43026 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 AC007322.4-201ENST00000509611 723 ntBASIC19.78■□□□□ 0.76
GDF5P43026 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.78■□□□□ 0.76
GDF5P43026 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.78■□□□□ 0.76
GDF5P43026 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.78■□□□□ 0.76
GDF5P43026 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
GDF5P43026 IKBKGP1-201ENST00000612193 1073 ntBASIC19.78■□□□□ 0.76
GDF5P43026 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.78■□□□□ 0.76
GDF5P43026 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GDF5P43026 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GDF5P43026 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.77■□□□□ 0.76
GDF5P43026 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.77■□□□□ 0.76
GDF5P43026 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
GDF5P43026 KRT8P36-201ENST00000489121 1440 ntBASIC19.77■□□□□ 0.76
GDF5P43026 AC068338.2-201ENST00000563278 1430 ntBASIC19.77■□□□□ 0.76
GDF5P43026 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.77■□□□□ 0.76
GDF5P43026 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
GDF5P43026 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
GDF5P43026 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDF5P43026 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GDF5P43026 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF5P43026 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GDF5P43026 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.77■□□□□ 0.76
GDF5P43026 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
GDF5P43026 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GDF5P43026 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.77■□□□□ 0.75
GDF5P43026 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GDF5P43026 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
GDF5P43026 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GDF5P43026 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.76■□□□□ 0.75
GDF5P43026 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
GDF5P43026 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.76■□□□□ 0.75
GDF5P43026 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.76■□□□□ 0.75
GDF5P43026 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.76■□□□□ 0.75
GDF5P43026 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
GDF5P43026 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.76■□□□□ 0.75
GDF5P43026 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.76■□□□□ 0.75
GDF5P43026 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.76■□□□□ 0.75
GDF5P43026 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GDF5P43026 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.76■□□□□ 0.75
GDF5P43026 AC092437.1-201ENST00000624794 1048 ntBASIC19.76■□□□□ 0.75
GDF5P43026 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.76■□□□□ 0.75
GDF5P43026 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GDF5P43026 AC099778.1-201ENST00000568593 1911 ntBASIC19.76■□□□□ 0.75
GDF5P43026 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GDF5P43026 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.76■□□□□ 0.75
GDF5P43026 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
GDF5P43026 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.75■□□□□ 0.75
GDF5P43026 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.75■□□□□ 0.75
GDF5P43026 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF5P43026 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.75■□□□□ 0.75
GDF5P43026 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF5P43026 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDF5P43026 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.75■□□□□ 0.75
GDF5P43026 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.75■□□□□ 0.75
GDF5P43026 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GDF5P43026 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.75■□□□□ 0.75
GDF5P43026 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.75■□□□□ 0.75
GDF5P43026 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.75■□□□□ 0.75
GDF5P43026 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GDF5P43026 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
GDF5P43026 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.75■□□□□ 0.75
GDF5P43026 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.75■□□□□ 0.75
GDF5P43026 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GDF5P43026 CYP21A1P-202ENST00000354927 1481 ntBASIC19.74■□□□□ 0.75
GDF5P43026 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GDF5P43026 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GDF5P43026 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GDF5P43026 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GDF5P43026 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms