Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC007322.4-201ENST00000509611 723 ntBASIC18.66■□□□□ 0.58
SLC1A3P43003 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
SLC1A3P43003 MFSD11-216ENST00000590393 1141 ntBASIC18.66■□□□□ 0.58
SLC1A3P43003 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC1A3P43003 AL591742.1-201ENST00000604433 565 ntBASIC18.66■□□□□ 0.58
SLC1A3P43003 AC013268.1-206ENST00000638368 961 ntBASIC18.66■□□□□ 0.58
SLC1A3P43003 AC112229.1-201ENST00000639295 961 ntBASIC18.66■□□□□ 0.58
SLC1A3P43003 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC1A3P43003 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC1A3P43003 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A3P43003 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A3P43003 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC1A3P43003 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SLC1A3P43003 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A3P43003 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC1A3P43003 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A3P43003 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A3P43003 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A3P43003 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A3P43003 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A3P43003 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A3P43003 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A3P43003 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A3P43003 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A3P43003 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A3P43003 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A3P43003 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.64■□□□□ 0.57
SLC1A3P43003 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC1A3P43003 AL162412.1-201ENST00000567129 965 ntBASIC18.64■□□□□ 0.57
SLC1A3P43003 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC1A3P43003 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC1A3P43003 AC092666.2-201ENST00000613287 246 ntBASIC18.64■□□□□ 0.57
SLC1A3P43003 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SLC1A3P43003 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A3P43003 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A3P43003 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLC1A3P43003 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SLC1A3P43003 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLC1A3P43003 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC1A3P43003 AC020907.5-201ENST00000624372 1936 ntBASIC18.63■□□□□ 0.57
SLC1A3P43003 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
SLC1A3P43003 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC1A3P43003 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A3P43003 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A3P43003 AC022517.1-201ENST00000592429 346 ntBASIC18.63■□□□□ 0.57
SLC1A3P43003 AC011767.1-201ENST00000617410 1153 ntBASIC18.63■□□□□ 0.57
SLC1A3P43003 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC1A3P43003 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.63■□□□□ 0.57
SLC1A3P43003 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC1A3P43003 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A3P43003 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC1A3P43003 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 FAM21FP-204ENST00000608637 956 ntBASIC18.62■□□□□ 0.57
SLC1A3P43003 BID-214ENST00000617586 542 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC1A3P43003 MIR2861-201ENST00000636310 90 ntBASIC18.62■□□□□ 0.57
SLC1A3P43003 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC1A3P43003 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SLC1A3P43003 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC1A3P43003 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC1A3P43003 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC1A3P43003 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms