Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeastyeast

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP2P42843 ATP7YKL016C 525 nt2.6□□□□□ -1.99
SKP2P42843 YOR121CYOR121C 306 nt2.6□□□□□ -1.99
SKP2P42843 ATP3YBR039W 936 nt2.6□□□□□ -1.99
SKP2P42843 PUT3YKL015W 2940 nt2.6□□□□□ -1.99
SKP2P42843 PHO91YNR013C 2685 nt2.59□□□□□ -1.99
SKP2P42843 NAN1YPL126W 2691 nt2.59□□□□□ -1.99
SKP2P42843 SNX41YDR425W 1878 nt2.59□□□□□ -1.99
SKP2P42843 HRD3YLR207W 2502 nt2.59□□□□□ -1.99
SKP2P42843 YKL083WYKL083W 615 nt2.59□□□□□ -1.99
SKP2P42843 CDC24YAL041W 2565 nt2.59□□□□□ -1.99
SKP2P42843 YJL070CYJL070C 2667 nt2.59□□□□□ -2
SKP2P42843 PRP6YBR055C 2700 nt2.59□□□□□ -2
SKP2P42843 PRK1YIL095W 2433 nt2.59□□□□□ -2
SKP2P42843 CYR1YJL005W 6081 nt2.58□□□□□ -2
SKP2P42843 IPT1YDR072C 1584 nt2.58□□□□□ -2
SKP2P42843 DIE2YGR227W 1578 nt2.58□□□□□ -2
SKP2P42843 YJL202CYJL202C 348 nt2.58□□□□□ -2
SKP2P42843 LSM7YNL147W 348 nt2.58□□□□□ -2
SKP2P42843 YOR146WYOR146W 306 nt2.58□□□□□ -2
SKP2P42843 EGD1YPL037C 474 nt2.58□□□□□ -2
SKP2P42843 SRB8YCR081W 4284 nt2.58□□□□□ -2
SKP2P42843 MSB1YOR188W 3414 nt2.57□□□□□ -2
SKP2P42843 GCN4YEL009C 846 nt2.57□□□□□ -2
SKP2P42843 YOR055WYOR055W 435 nt2.57□□□□□ -2
SKP2P42843 OST1YJL002C 1431 nt2.57□□□□□ -2
SKP2P42843 COX1Q0045 1605 nt2.57□□□□□ -2
SKP2P42843 ARP8YOR141C 2646 nt2.56□□□□□ -2
SKP2P42843 MPH1YIR002C 2982 nt2.56□□□□□ -2
SKP2P42843 SGM1YJR134C 2124 nt2.56□□□□□ -2
SKP2P42843 BAS1YKR099W 2436 nt2.56□□□□□ -2
SKP2P42843 snR8snR8 190 nt2.56□□□□□ -2
SKP2P42843 RPS24AYER074W 408 nt2.56□□□□□ -2
SKP2P42843 TMA22YJR014W 597 nt2.56□□□□□ -2
SKP2P42843 YLR031WYLR031W 561 nt2.56□□□□□ -2
SKP2P42843 YMR324CYMR324C 243 nt2.56□□□□□ -2
SKP2P42843 YPL238CYPL238C 390 nt2.56□□□□□ -2
SKP2P42843 PFF1YBR074W 2931 nt2.56□□□□□ -2
SKP2P42843 PSK2YOL045W 3306 nt2.56□□□□□ -2
SKP2P42843 PHO2YDL106C 1680 nt2.56□□□□□ -2
SKP2P42843 YNL018CYNL018C 1839 nt2.56□□□□□ -2
SKP2P42843 YPR089WYPR089W 2667 nt2.55□□□□□ -2
SKP2P42843 SMC6YLR383W 3345 nt2.55□□□□□ -2
SKP2P42843 YER023C-AYER023C-A 213 nt2.55□□□□□ -2
SKP2P42843 YER121WYER121W 345 nt2.55□□□□□ -2
SKP2P42843 VOA1YGR106C 798 nt2.55□□□□□ -2
SKP2P42843 URM1YIL008W 300 nt2.55□□□□□ -2
SKP2P42843 GNT1YOR320C 1476 nt2.55□□□□□ -2
SKP2P42843 HOS4YIL112W 3252 nt2.55□□□□□ -2
SKP2P42843 YSW1YBR148W 1830 nt2.54□□□□□ -2
SKP2P42843 IRC10YOL015W 1761 nt2.54□□□□□ -2
SKP2P42843 INP51YIL002C 2841 nt2.54□□□□□ -2
SKP2P42843 Q0032Q0032 291 nt2.54□□□□□ -2
SKP2P42843 HMRA2YCR096C 360 nt2.54□□□□□ -2
SKP2P42843 HYP2YEL034W 474 nt2.54□□□□□ -2
SKP2P42843 YBR085C-AYBR085C-A 258 nt2.54□□□□□ -2
SKP2P42843 INP53YOR109W 3324 nt2.54□□□□□ -2
SKP2P42843 MRD1YPR112C 2664 nt2.54□□□□□ -2
SKP2P42843 snR65snR65 100 nt2.53□□□□□ -2
SKP2P42843 YER076W-AYER076W-A 348 nt2.53□□□□□ -2
SKP2P42843 YGR050CYGR050C 357 nt2.53□□□□□ -2
SKP2P42843 GRX8YLR364W 330 nt2.53□□□□□ -2
SKP2P42843 TIM18YOR297C 579 nt2.53□□□□□ -2
SKP2P42843 UBP15YMR304W 3693 nt2.53□□□□□ -2.01
SKP2P42843 RTT10YPL183C 3042 nt2.52□□□□□ -2.01
SKP2P42843 REV1YOR346W 2958 nt2.52□□□□□ -2.01
SKP2P42843 YFL032WYFL032W 321 nt2.52□□□□□ -2.01
SKP2P42843 YFR056CYFR056C 369 nt2.52□□□□□ -2.01
SKP2P42843 HOP2YGL033W 657 nt2.52□□□□□ -2.01
SKP2P42843 ACB1YGR037C 264 nt2.52□□□□□ -2.01
SKP2P42843 tW(UCA)QtW(UCA)Q 74 nt2.52□□□□□ -2.01
SKP2P42843 RPS18BYML026C 441 nt2.52□□□□□ -2.01
SKP2P42843 VTI1YMR197C 654 nt2.52□□□□□ -2.01
SKP2P42843 KSP1YHR082C 3090 nt2.52□□□□□ -2.01
SKP2P42843 KAP123YER110C 3342 nt2.52□□□□□ -2.01
SKP2P42843 UBP11YKR098C 2154 nt2.51□□□□□ -2.01
SKP2P42843 KEL2YGR238C 2649 nt2.51□□□□□ -2.01
SKP2P42843 CBF2YGR140W 2871 nt2.51□□□□□ -2.01
SKP2P42843 snR79snR79 84 nt2.51□□□□□ -2.01
SKP2P42843 YAR029WYAR029W 225 nt2.51□□□□□ -2.01
SKP2P42843 LCL1YPL056C 306 nt2.51□□□□□ -2.01
SKP2P42843 SIR3YLR442C 2937 nt2.5□□□□□ -2.01
SKP2P42843 YDL025W-AYDL025W-A 105 nt2.5□□□□□ -2.01
SKP2P42843 YDR102CYDR102C 333 nt2.5□□□□□ -2.01
SKP2P42843 SHE2YKL130C 741 nt2.5□□□□□ -2.01
SKP2P42843 YOR225WYOR225W 330 nt2.5□□□□□ -2.01
SKP2P42843 NCL1YBL024W 2055 nt2.49□□□□□ -2.01
SKP2P42843 ESC1YMR219W 4977 nt2.49□□□□□ -2.01
SKP2P42843 PTC5YOR090C 1719 nt2.49□□□□□ -2.01
SKP2P42843 YGL014C-AYGL014C-A 162 nt2.49□□□□□ -2.01
SKP2P42843 SMD1YGR074W 441 nt2.49□□□□□ -2.01
SKP2P42843 MCM22YJR135C 720 nt2.49□□□□□ -2.01
SKP2P42843 YAL063C-AYAL063C-A 291 nt2.49□□□□□ -2.01
SKP2P42843 YEF3YLR249W 3135 nt2.49□□□□□ -2.01
SKP2P42843 VPS16YPL045W 2397 nt2.49□□□□□ -2.01
SKP2P42843 TRS130YMR218C 3309 nt2.48□□□□□ -2.01
SKP2P42843 VPS35YJL154C 2835 nt2.48□□□□□ -2.01
SKP2P42843 BRP1YGL007W 378 nt2.48□□□□□ -2.01
SKP2P42843 snR36snR36 182 nt2.48□□□□□ -2.01
SKP2P42843 NUP100YKL068W 2880 nt2.47□□□□□ -2.01
SKP2P42843 MRP10YDL045W-A 288 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 32.6 ms