Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AC145350.3-201ENST00000569033 163 ntBASIC20.6■□□□□ 0.89
GRIA1P42261 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.6■□□□□ 0.89
GRIA1P42261 AC016405.3-201ENST00000607710 860 ntBASIC20.6■□□□□ 0.89
GRIA1P42261 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIA1P42261 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIA1P42261 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIA1P42261 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.6■□□□□ 0.89
GRIA1P42261 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.59■□□□□ 0.89
GRIA1P42261 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIA1P42261 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.59■□□□□ 0.89
GRIA1P42261 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIA1P42261 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.59■□□□□ 0.89
GRIA1P42261 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 CDV3P1-201ENST00000471403 739 ntBASIC20.59■□□□□ 0.89
GRIA1P42261 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.59■□□□□ 0.89
GRIA1P42261 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.59■□□□□ 0.89
GRIA1P42261 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 MFSD11-216ENST00000590393 1141 ntBASIC20.59■□□□□ 0.89
GRIA1P42261 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIA1P42261 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIA1P42261 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIA1P42261 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.59■□□□□ 0.89
GRIA1P42261 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIA1P42261 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.58■□□□□ 0.89
GRIA1P42261 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GRIA1P42261 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GRIA1P42261 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.89
GRIA1P42261 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
GRIA1P42261 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GRIA1P42261 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.58■□□□□ 0.89
GRIA1P42261 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GRIA1P42261 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.58■□□□□ 0.89
GRIA1P42261 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.58■□□□□ 0.89
GRIA1P42261 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.58■□□□□ 0.89
GRIA1P42261 AC011767.1-201ENST00000617410 1153 ntBASIC20.58■□□□□ 0.89
GRIA1P42261 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.58■□□□□ 0.89
GRIA1P42261 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GRIA1P42261 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GRIA1P42261 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GRIA1P42261 TCF3P1-201ENST00000423021 1937 ntBASIC20.58■□□□□ 0.88
GRIA1P42261 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GRIA1P42261 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
GRIA1P42261 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GRIA1P42261 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GRIA1P42261 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GRIA1P42261 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GRIA1P42261 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
GRIA1P42261 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.57■□□□□ 0.88
GRIA1P42261 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.57■□□□□ 0.88
GRIA1P42261 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GRIA1P42261 AL591742.1-201ENST00000604433 565 ntBASIC20.57■□□□□ 0.88
GRIA1P42261 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.57■□□□□ 0.88
GRIA1P42261 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GRIA1P42261 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.57■□□□□ 0.88
GRIA1P42261 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GRIA1P42261 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GRIA1P42261 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
GRIA1P42261 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
GRIA1P42261 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.56■□□□□ 0.88
GRIA1P42261 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
GRIA1P42261 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.56■□□□□ 0.88
GRIA1P42261 DPP3P2-201ENST00000416030 1696 ntBASIC20.56■□□□□ 0.88
GRIA1P42261 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GRIA1P42261 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
GRIA1P42261 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GRIA1P42261 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GRIA1P42261 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GRIA1P42261 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
GRIA1P42261 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
GRIA1P42261 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
GRIA1P42261 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
GRIA1P42261 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.55■□□□□ 0.88
GRIA1P42261 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GRIA1P42261 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GRIA1P42261 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
GRIA1P42261 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GRIA1P42261 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms