Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 YGL014C-AYGL014C-A 162 nt2.63□□□□□ -1.99
VPS27P40343 AYR1YIL124W 894 nt2.63□□□□□ -1.99
VPS27P40343 ZEO1YOL109W 342 nt2.63□□□□□ -1.99
VPS27P40343 YOL159CYOL159C 516 nt2.63□□□□□ -1.99
VPS27P40343 CDC24YAL041W 2565 nt2.63□□□□□ -1.99
VPS27P40343 SWR1YDR334W 4545 nt2.63□□□□□ -1.99
VPS27P40343 MMS22YLR320W 4365 nt2.63□□□□□ -1.99
VPS27P40343 NIC96YFR002W 2520 nt2.63□□□□□ -1.99
VPS27P40343 TUS1YLR425W 3924 nt2.62□□□□□ -1.99
VPS27P40343 FMP16YDR070C 282 nt2.62□□□□□ -1.99
VPS27P40343 RPL27BYDR471W 411 nt2.62□□□□□ -1.99
VPS27P40343 YMR324CYMR324C 243 nt2.62□□□□□ -1.99
VPS27P40343 RRP6YOR001W 2202 nt2.61□□□□□ -1.99
VPS27P40343 SMD1YGR074W 441 nt2.61□□□□□ -1.99
VPS27P40343 YHR139C-AYHR139C-A 312 nt2.61□□□□□ -1.99
VPS27P40343 ATP7YKL016C 525 nt2.61□□□□□ -1.99
VPS27P40343 UBC7YMR022W 498 nt2.61□□□□□ -1.99
VPS27P40343 VMA9YCL005W-A 222 nt2.61□□□□□ -1.99
VPS27P40343 IRC10YOL015W 1761 nt2.61□□□□□ -1.99
VPS27P40343 NEO1YIL048W 3456 nt2.61□□□□□ -1.99
VPS27P40343 YER087C-AYER087C-A 552 nt2.6□□□□□ -1.99
VPS27P40343 YKL165C-AYKL165C-A 234 nt2.6□□□□□ -1.99
VPS27P40343 SIR4YDR227W 4077 nt2.59□□□□□ -1.99
VPS27P40343 MET18YIL128W 3099 nt2.59□□□□□ -1.99
VPS27P40343 MKT1YNL085W 2493 nt2.59□□□□□ -1.99
VPS27P40343 IST2YBR086C 2841 nt2.59□□□□□ -1.99
VPS27P40343 YDR269CYDR269C 324 nt2.59□□□□□ -1.99
VPS27P40343 MZM1YDR493W 372 nt2.59□□□□□ -1.99
VPS27P40343 YER121WYER121W 345 nt2.59□□□□□ -1.99
VPS27P40343 NOP10YHR072W-A 177 nt2.59□□□□□ -1.99
VPS27P40343 YHR180W-AYHR180W-A 183 nt2.59□□□□□ -1.99
VPS27P40343 YOR192C-CYOR192C-C 237 nt2.59□□□□□ -1.99
VPS27P40343 SPP41YDR464W 4308 nt2.59□□□□□ -2
VPS27P40343 RRP12YPL012W 3687 nt2.59□□□□□ -2
VPS27P40343 VPS35YJL154C 2835 nt2.58□□□□□ -2
VPS27P40343 COX1Q0045 1605 nt2.58□□□□□ -2
VPS27P40343 YNL010WYNL010W 726 nt2.58□□□□□ -2
VPS27P40343 SCH9YHR205W 2475 nt2.58□□□□□ -2
VPS27P40343 GIP3YPL137C 3831 nt2.57□□□□□ -2
VPS27P40343 BFA1YJR053W 1725 nt2.57□□□□□ -2
VPS27P40343 TMA22YJR014W 597 nt2.57□□□□□ -2
VPS27P40343 TMA10YLR327C 261 nt2.57□□□□□ -2
VPS27P40343 snR79snR79 84 nt2.56□□□□□ -2
VPS27P40343 SDH7YDR511W 402 nt2.56□□□□□ -2
VPS27P40343 SEC22YLR268W 645 nt2.56□□□□□ -2
VPS27P40343 RPS18BYML026C 441 nt2.56□□□□□ -2
VPS27P40343 YML084WYML084W 309 nt2.56□□□□□ -2
VPS27P40343 MRPL50YNR022C 420 nt2.56□□□□□ -2
VPS27P40343 EGD1YPL037C 474 nt2.56□□□□□ -2
VPS27P40343 RTC6YPL183W-A 282 nt2.56□□□□□ -2
VPS27P40343 PUT3YKL015W 2940 nt2.56□□□□□ -2
VPS27P40343 YSW1YBR148W 1830 nt2.56□□□□□ -2
VPS27P40343 TOF1YNL273W 3717 nt2.56□□□□□ -2
VPS27P40343 KOG1YHR186C 4674 nt2.56□□□□□ -2
VPS27P40343 snR56snR56 88 nt2.55□□□□□ -2
VPS27P40343 SWF1YDR126W 1011 nt2.55□□□□□ -2
VPS27P40343 YER172C-AYER172C-A 381 nt2.55□□□□□ -2
VPS27P40343 MSL1YIR009W 336 nt2.55□□□□□ -2
VPS27P40343 YPR170W-AYPR170W-A 186 nt2.55□□□□□ -2
VPS27P40343 SPO22YIL073C 2928 nt2.55□□□□□ -2
VPS27P40343 LSO2YGR169C-A 279 nt2.54□□□□□ -2
VPS27P40343 YOR293C-AYOR293C-A 150 nt2.54□□□□□ -2
VPS27P40343 TRA1YHR099W 11235 nt2.54□□□□□ -2
VPS27P40343 RTT107YHR154W 3213 nt2.54□□□□□ -2
VPS27P40343 RGA1YOR127W 3024 nt2.54□□□□□ -2
VPS27P40343 MCD1YDL003W 1701 nt2.54□□□□□ -2
VPS27P40343 VPH1YOR270C 2523 nt2.53□□□□□ -2
VPS27P40343 CBS1YDL069C 690 nt2.53□□□□□ -2
VPS27P40343 EMP24YGL200C 612 nt2.53□□□□□ -2
VPS27P40343 YHL009W-AYHL009W-A 1242 nt2.53□□□□□ -2
VPS27P40343 URM1YIL008W 300 nt2.53□□□□□ -2
VPS27P40343 RPS24BYIL069C 408 nt2.53□□□□□ -2
VPS27P40343 YLR334CYLR334C 381 nt2.53□□□□□ -2
VPS27P40343 YOR053WYOR053W 342 nt2.53□□□□□ -2
VPS27P40343 YPL185WYPL185W 396 nt2.53□□□□□ -2
VPS27P40343 YBR285WYBR285W 435 nt2.53□□□□□ -2
VPS27P40343 GYP5YPL249C 2685 nt2.53□□□□□ -2.01
VPS27P40343 DIE2YGR227W 1578 nt2.53□□□□□ -2.01
VPS27P40343 RTT101YJL047C 2529 nt2.52□□□□□ -2.01
VPS27P40343 CDC53YDL132W 2448 nt2.52□□□□□ -2.01
VPS27P40343 YER023C-AYER023C-A 213 nt2.52□□□□□ -2.01
VPS27P40343 YLR287CYLR287C 1068 nt2.52□□□□□ -2.01
VPS27P40343 TOR1YJR066W 7413 nt2.52□□□□□ -2.01
VPS27P40343 RUD3YOR216C 1455 nt2.52□□□□□ -2.01
VPS27P40343 MGM1YOR211C 2646 nt2.51□□□□□ -2.01
VPS27P40343 YAL068W-AYAL068W-A 255 nt2.51□□□□□ -2.01
VPS27P40343 FCF2YLR051C 654 nt2.51□□□□□ -2.01
VPS27P40343 YLR434CYLR434C 384 nt2.51□□□□□ -2.01
VPS27P40343 TRL1YJL087C 2484 nt2.5□□□□□ -2.01
VPS27P40343 YDL118WYDL118W 381 nt2.5□□□□□ -2.01
VPS27P40343 YER076W-AYER076W-A 348 nt2.5□□□□□ -2.01
VPS27P40343 YBL108WYBL108W 306 nt2.5□□□□□ -2.01
VPS27P40343 SNC2YOR327C 348 nt2.5□□□□□ -2.01
VPS27P40343 KAR3YPR141C 2190 nt2.5□□□□□ -2.01
VPS27P40343 BNI1YNL271C 5862 nt2.49□□□□□ -2.01
VPS27P40343 SNC1YAL030W 354 nt2.49□□□□□ -2.01
VPS27P40343 BSC3YLR465C 309 nt2.49□□□□□ -2.01
VPS27P40343 YOR333CYOR333C 417 nt2.49□□□□□ -2.01
VPS27P40343 YPL238CYPL238C 390 nt2.49□□□□□ -2.01
VPS27P40343 FKS1YLR342W 5631 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 112.5 ms