Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 MRPL31YKL138C 396 nt2.23□□□□□ -2.05
RPH1P39956 YLR031WYLR031W 561 nt2.23□□□□□ -2.05
RPH1P39956 CCW14YLR390W-A 717 nt2.23□□□□□ -2.05
RPH1P39956 VTI1YMR197C 654 nt2.23□□□□□ -2.05
RPH1P39956 YOR199WYOR199W 330 nt2.23□□□□□ -2.05
RPH1P39956 SWR1YDR334W 4545 nt2.22□□□□□ -2.05
RPH1P39956 YDL041WYDL041W 354 nt2.22□□□□□ -2.05
RPH1P39956 YHR052W-AYHR052W-A 195 nt2.22□□□□□ -2.05
RPH1P39956 YHR054W-AYHR054W-A 195 nt2.22□□□□□ -2.05
RPH1P39956 UBP2YOR124C 3819 nt2.22□□□□□ -2.05
RPH1P39956 YPL238CYPL238C 390 nt2.22□□□□□ -2.05
RPH1P39956 VMA9YCL005W-A 222 nt2.22□□□□□ -2.05
RPH1P39956 ATG11YPR049C 3537 nt2.21□□□□□ -2.06
RPH1P39956 ASG1YIL130W 2895 nt2.21□□□□□ -2.06
RPH1P39956 RPL40AYIL148W 387 nt2.21□□□□□ -2.06
RPH1P39956 YLR458WYLR458W 381 nt2.21□□□□□ -2.06
RPH1P39956 YML099W-AYML099W-A 330 nt2.21□□□□□ -2.06
RPH1P39956 YPL038W-AYPL038W-A 192 nt2.21□□□□□ -2.06
RPH1P39956 MGR1YCL044C 1254 nt2.21□□□□□ -2.06
RPH1P39956 YJR003CYJR003C 1560 nt2.2□□□□□ -2.06
RPH1P39956 YFH1YDL120W 525 nt2.2□□□□□ -2.06
RPH1P39956 YER023C-AYER023C-A 213 nt2.2□□□□□ -2.06
RPH1P39956 CAJ1YER048C 1176 nt2.2□□□□□ -2.06
RPH1P39956 YHR180W-AYHR180W-A 183 nt2.2□□□□□ -2.06
RPH1P39956 ABM1YJR108W 372 nt2.2□□□□□ -2.06
RPH1P39956 RAM2YKL019W 951 nt2.2□□□□□ -2.06
RPH1P39956 YAL059C-AYAL059C-A 423 nt2.2□□□□□ -2.06
RPH1P39956 RGM1YMR182C 636 nt2.2□□□□□ -2.06
RPH1P39956 TAE2YPL009C 3117 nt2.2□□□□□ -2.06
RPH1P39956 UTP22YGR090W 3714 nt2.19□□□□□ -2.06
RPH1P39956 EDS1YBR033W 2760 nt2.19□□□□□ -2.06
RPH1P39956 MSS11YMR164C 2277 nt2.19□□□□□ -2.06
RPH1P39956 IRC10YOL015W 1761 nt2.19□□□□□ -2.06
RPH1P39956 snR76snR76 109 nt2.19□□□□□ -2.06
RPH1P39956 YEL057CYEL057C 702 nt2.19□□□□□ -2.06
RPH1P39956 RRP12YPL012W 3687 nt2.19□□□□□ -2.06
RPH1P39956 snR79snR79 84 nt2.18□□□□□ -2.06
RPH1P39956 GCN4YEL009C 846 nt2.18□□□□□ -2.06
RPH1P39956 YKL118WYKL118W 312 nt2.18□□□□□ -2.06
RPH1P39956 YMR193C-AYMR193C-A 387 nt2.18□□□□□ -2.06
RPH1P39956 YAF9YNL107W 681 nt2.18□□□□□ -2.06
RPH1P39956 YBR197CYBR197C 654 nt2.18□□□□□ -2.06
RPH1P39956 NOP14YDL148C 2433 nt2.18□□□□□ -2.06
RPH1P39956 BAS1YKR099W 2436 nt2.18□□□□□ -2.06
RPH1P39956 MCD1YDL003W 1701 nt2.17□□□□□ -2.06
RPH1P39956 TIM9YEL020W-A 264 nt2.17□□□□□ -2.06
RPH1P39956 YMR324CYMR324C 243 nt2.17□□□□□ -2.06
RPH1P39956 FPR1YNL135C 345 nt2.17□□□□□ -2.06
RPH1P39956 BNI1YNL271C 5862 nt2.17□□□□□ -2.06
RPH1P39956 TFC3YAL001C 3483 nt2.16□□□□□ -2.06
RPH1P39956 CDC50YCR094W 1176 nt2.16□□□□□ -2.06
RPH1P39956 RPS24AYER074W 408 nt2.16□□□□□ -2.06
RPH1P39956 YGR050CYGR050C 357 nt2.16□□□□□ -2.06
RPH1P39956 TMA22YJR014W 597 nt2.16□□□□□ -2.06
RPH1P39956 ATP7YKL016C 525 nt2.16□□□□□ -2.06
RPH1P39956 LCL2YLR104W 396 nt2.16□□□□□ -2.06
RPH1P39956 YNL018CYNL018C 1839 nt2.16□□□□□ -2.06
RPH1P39956 CLN3YAL040C 1743 nt2.16□□□□□ -2.06
RPH1P39956 UFD4YKL010C 4452 nt2.16□□□□□ -2.06
RPH1P39956 YFR016CYFR016C 3702 nt2.16□□□□□ -2.06
RPH1P39956 CDC24YAL041W 2565 nt2.15□□□□□ -2.06
RPH1P39956 KAP123YER110C 3342 nt2.15□□□□□ -2.07
RPH1P39956 SDC25YLL016W 3147 nt2.15□□□□□ -2.07
RPH1P39956 NHP2YDL208W 471 nt2.15□□□□□ -2.07
RPH1P39956 YER181CYER181C 324 nt2.15□□□□□ -2.07
RPH1P39956 MSL1YIR009W 336 nt2.15□□□□□ -2.07
RPH1P39956 YAR053WYAR053W 297 nt2.15□□□□□ -2.07
RPH1P39956 YPR097WYPR097W 3222 nt2.14□□□□□ -2.07
RPH1P39956 BRP1YGL007W 378 nt2.14□□□□□ -2.07
RPH1P39956 YHL037CYHL037C 402 nt2.14□□□□□ -2.07
RPH1P39956 tW(UCA)QtW(UCA)Q 74 nt2.14□□□□□ -2.07
RPH1P39956 RPS18BYML026C 441 nt2.14□□□□□ -2.07
RPH1P39956 RPL9BYNL067W 576 nt2.14□□□□□ -2.07
RPH1P39956 ROX1YPR065W 1107 nt2.14□□□□□ -2.07
RPH1P39956 YPR146CYPR146C 330 nt2.14□□□□□ -2.07
RPH1P39956 UBP1YDL122W 2430 nt2.14□□□□□ -2.07
RPH1P39956 IRA2YOL081W 9240 nt2.14□□□□□ -2.07
RPH1P39956 ALK2YBL009W 2031 nt2.13□□□□□ -2.07
RPH1P39956 SWT1YOR166C 1377 nt2.13□□□□□ -2.07
RPH1P39956 AFI1YOR129C 2682 nt2.13□□□□□ -2.07
RPH1P39956 YDL152WYDL152W 366 nt2.13□□□□□ -2.07
RPH1P39956 YIL115W-AYIL115W-A 372 nt2.13□□□□□ -2.07
RPH1P39956 YJL052C-AYJL052C-A 120 nt2.13□□□□□ -2.07
RPH1P39956 YJL202CYJL202C 348 nt2.13□□□□□ -2.07
RPH1P39956 YAL042C-AYAL042C-A 378 nt2.13□□□□□ -2.07
RPH1P39956 RPL26AYLR344W 384 nt2.13□□□□□ -2.07
RPH1P39956 RPL36AYMR194W 303 nt2.13□□□□□ -2.07
RPH1P39956 TIM18YOR297C 579 nt2.13□□□□□ -2.07
RPH1P39956 BIL1YOR304C-A 231 nt2.13□□□□□ -2.07
RPH1P39956 RGA1YOR127W 3024 nt2.12□□□□□ -2.07
RPH1P39956 PCF11YDR228C 1881 nt2.12□□□□□ -2.07
RPH1P39956 ELG1YOR144C 2376 nt2.12□□□□□ -2.07
RPH1P39956 WIP1YDR374W-A 270 nt2.12□□□□□ -2.07
RPH1P39956 YDR413CYDR413C 576 nt2.12□□□□□ -2.07
RPH1P39956 MZM1YDR493W 372 nt2.12□□□□□ -2.07
RPH1P39956 YER121WYER121W 345 nt2.12□□□□□ -2.07
RPH1P39956 YFR056CYFR056C 369 nt2.12□□□□□ -2.07
RPH1P39956 LSO2YGR169C-A 279 nt2.12□□□□□ -2.07
RPH1P39956 LSM7YNL147W 348 nt2.12□□□□□ -2.07
RPH1P39956 CRS5YOR031W 210 nt2.12□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms