Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RPL3P39023 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RPL3P39023 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.27■□□□□ 0.68
RPL3P39023 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.27■□□□□ 0.68
RPL3P39023 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RPL3P39023 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RPL3P39023 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.27■□□□□ 0.68
RPL3P39023 NTF6G-201ENST00000591094 616 ntBASIC19.27■□□□□ 0.68
RPL3P39023 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.27■□□□□ 0.68
RPL3P39023 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RPL3P39023 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL3P39023 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPL3P39023 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPL3P39023 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPL3P39023 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPL3P39023 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
RPL3P39023 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.26■□□□□ 0.67
RPL3P39023 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RPL3P39023 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 AC099778.1-201ENST00000568593 1911 ntBASIC19.26■□□□□ 0.67
RPL3P39023 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RPL3P39023 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 TERF1P5-201ENST00000477545 1207 ntBASIC19.26■□□□□ 0.67
RPL3P39023 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.26■□□□□ 0.67
RPL3P39023 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.26■□□□□ 0.67
RPL3P39023 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 AL162412.1-201ENST00000567129 965 ntBASIC19.26■□□□□ 0.67
RPL3P39023 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
RPL3P39023 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.26■□□□□ 0.67
RPL3P39023 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RPL3P39023 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.26■□□□□ 0.67
RPL3P39023 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.26■□□□□ 0.67
RPL3P39023 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPL3P39023 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.25■□□□□ 0.67
RPL3P39023 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.25■□□□□ 0.67
RPL3P39023 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.25■□□□□ 0.67
RPL3P39023 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.25■□□□□ 0.67
RPL3P39023 KRT18P61-201ENST00000585825 1298 ntBASIC19.25■□□□□ 0.67
RPL3P39023 AL591742.1-201ENST00000604433 565 ntBASIC19.25■□□□□ 0.67
RPL3P39023 AC010536.3-201ENST00000620306 533 ntBASIC19.25■□□□□ 0.67
RPL3P39023 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
RPL3P39023 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RPL3P39023 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPL3P39023 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.25■□□□□ 0.67
RPL3P39023 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.25■□□□□ 0.67
RPL3P39023 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RPL3P39023 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.24■□□□□ 0.67
RPL3P39023 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.24■□□□□ 0.67
RPL3P39023 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RPL3P39023 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
RPL3P39023 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.24■□□□□ 0.67
RPL3P39023 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.24■□□□□ 0.67
RPL3P39023 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
RPL3P39023 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPL3P39023 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.23■□□□□ 0.67
RPL3P39023 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.23■□□□□ 0.67
RPL3P39023 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RPL3P39023 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RPL3P39023 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RPL3P39023 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms