Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 RPB11YOL005C 363 nt1.3□□□□□ -2.2
CUE1P38428 MEI5YPL121C 669 nt1.3□□□□□ -2.2
CUE1P38428 FYV8YGR196C 2454 nt1.29□□□□□ -2.2
CUE1P38428 MNL2YLR057W 2550 nt1.29□□□□□ -2.2
CUE1P38428 SEC22YLR268W 645 nt1.29□□□□□ -2.2
CUE1P38428 YOR146WYOR146W 306 nt1.29□□□□□ -2.2
CUE1P38428 PIK1YNL267W 3201 nt1.28□□□□□ -2.2
CUE1P38428 RTR2YDR066C 591 nt1.28□□□□□ -2.2
CUE1P38428 RPC25YKL144C 639 nt1.28□□□□□ -2.2
CUE1P38428 YLR198CYLR198C 360 nt1.28□□□□□ -2.2
CUE1P38428 RRI2YOL117W 1938 nt1.28□□□□□ -2.2
CUE1P38428 ALK1YGL021W 2283 nt1.28□□□□□ -2.2
CUE1P38428 RLM1YPL089C 2031 nt1.27□□□□□ -2.21
CUE1P38428 LSO2YGR169C-A 279 nt1.27□□□□□ -2.21
CUE1P38428 BMT5YIL096C 1011 nt1.27□□□□□ -2.21
CUE1P38428 YBR224WYBR224W 516 nt1.27□□□□□ -2.21
CUE1P38428 YBR287WYBR287W 1284 nt1.27□□□□□ -2.21
CUE1P38428 IRE1YHR079C 3348 nt1.27□□□□□ -2.21
CUE1P38428 LAA1YJL207C 6045 nt1.26□□□□□ -2.21
CUE1P38428 tQ(UUG)E2tQ(UUG)E2 72 nt1.26□□□□□ -2.21
CUE1P38428 YJL022WYJL022W 309 nt1.26□□□□□ -2.21
CUE1P38428 SDS22YKL193C 1017 nt1.26□□□□□ -2.21
CUE1P38428 CTR9YOL145C 3234 nt1.26□□□□□ -2.21
CUE1P38428 NCA2YPR155C 1851 nt1.25□□□□□ -2.21
CUE1P38428 FSH1YHR049W 732 nt1.25□□□□□ -2.21
CUE1P38428 YHR054CYHR054C 1065 nt1.25□□□□□ -2.21
CUE1P38428 IRC19YLL033W 693 nt1.25□□□□□ -2.21
CUE1P38428 YMR013C-AYMR013C-A 150 nt1.25□□□□□ -2.21
CUE1P38428 YCL002CYCL002C 792 nt1.25□□□□□ -2.21
CUE1P38428 SSK2YNR031C 4740 nt1.25□□□□□ -2.21
CUE1P38428 SGD1YLR336C 2700 nt1.25□□□□□ -2.21
CUE1P38428 TRM732YMR259C 4263 nt1.24□□□□□ -2.21
CUE1P38428 PMD1YER132C 5262 nt1.24□□□□□ -2.21
CUE1P38428 ABM1YJR108W 372 nt1.24□□□□□ -2.21
CUE1P38428 RPL37AYLR185W 267 nt1.24□□□□□ -2.21
CUE1P38428 SEN15YMR059W 387 nt1.24□□□□□ -2.21
CUE1P38428 IPP1YBR011C 864 nt1.24□□□□□ -2.21
CUE1P38428 PEP3YLR148W 2757 nt1.24□□□□□ -2.21
CUE1P38428 YFL002W-BYFL002W-B 1317 nt1.23□□□□□ -2.21
CUE1P38428 YGR161W-AYGR161W-A 1317 nt1.23□□□□□ -2.21
CUE1P38428 YBL100W-AYBL100W-A 1317 nt1.23□□□□□ -2.21
CUE1P38428 YCL020WYCL020W 1317 nt1.23□□□□□ -2.21
CUE1P38428 snR5snR5 204 nt1.23□□□□□ -2.21
CUE1P38428 YIL102CYIL102C 306 nt1.23□□□□□ -2.21
CUE1P38428 PFD1YJL179W 330 nt1.23□□□□□ -2.21
CUE1P38428 VPS55YJR044C 423 nt1.23□□□□□ -2.21
CUE1P38428 COF1YLL050C 432 nt1.23□□□□□ -2.21
CUE1P38428 CGI121YML036W 546 nt1.23□□□□□ -2.21
CUE1P38428 CDC31YOR257W 486 nt1.23□□□□□ -2.21
CUE1P38428 PIP2YOR363C 2991 nt1.23□□□□□ -2.21
CUE1P38428 EGD1YPL037C 474 nt1.23□□□□□ -2.21
CUE1P38428 YPR177CYPR177C 372 nt1.23□□□□□ -2.21
CUE1P38428 EST2YLR318W 2655 nt1.23□□□□□ -2.21
CUE1P38428 FIG2YCR089W 4830 nt1.23□□□□□ -2.21
CUE1P38428 KAR3YPR141C 2190 nt1.23□□□□□ -2.21
CUE1P38428 FRK1YPL141C 2598 nt1.22□□□□□ -2.21
CUE1P38428 DOT6YER088C 2013 nt1.22□□□□□ -2.21
CUE1P38428 IES5YER092W 378 nt1.22□□□□□ -2.21
CUE1P38428 MND1YGL183C 660 nt1.22□□□□□ -2.21
CUE1P38428 CIC1YHR052W 1131 nt1.22□□□□□ -2.21
CUE1P38428 YLR307C-AYLR307C-A 264 nt1.22□□□□□ -2.21
CUE1P38428 ATP20YPR020W 348 nt1.22□□□□□ -2.21
CUE1P38428 PBY1YBR094W 2262 nt1.21□□□□□ -2.22
CUE1P38428 YJL015CYJL015C 285 nt1.21□□□□□ -2.22
CUE1P38428 DCP1YOL149W 696 nt1.21□□□□□ -2.22
CUE1P38428 SEC21YNL287W 2808 nt1.21□□□□□ -2.22
CUE1P38428 REF2YDR195W 1602 nt1.2□□□□□ -2.22
CUE1P38428 YEL018C-AYEL018C-A 534 nt1.2□□□□□ -2.22
CUE1P38428 YFL012W-AYFL012W-A 375 nt1.2□□□□□ -2.22
CUE1P38428 YGR228WYGR228W 345 nt1.2□□□□□ -2.22
CUE1P38428 TIM10YHR005C-A 282 nt1.2□□□□□ -2.22
CUE1P38428 YKL183C-AYKL183C-A 213 nt1.2□□□□□ -2.22
CUE1P38428 MSN5YDR335W 3675 nt1.19□□□□□ -2.22
CUE1P38428 DGR2YKL121W 2559 nt1.19□□□□□ -2.22
CUE1P38428 VPS52YDR484W 1926 nt1.19□□□□□ -2.22
CUE1P38428 MTC7YEL033W 420 nt1.19□□□□□ -2.22
CUE1P38428 YLR285C-AYLR285C-A 171 nt1.19□□□□□ -2.22
CUE1P38428 YOR152CYOR152C 771 nt1.19□□□□□ -2.22
CUE1P38428 YBR063CYBR063C 1215 nt1.19□□□□□ -2.22
CUE1P38428 BI4Q0120 1917 nt1.19□□□□□ -2.22
CUE1P38428 MLH3YPL164C 2148 nt1.18□□□□□ -2.22
CUE1P38428 snR83snR83 306 nt1.18□□□□□ -2.22
CUE1P38428 HHT1YBR010W 411 nt1.18□□□□□ -2.22
CUE1P38428 IRR1YIL026C 3453 nt1.18□□□□□ -2.22
CUE1P38428 GNT1YOR320C 1476 nt1.18□□□□□ -2.22
CUE1P38428 MSH5YDL154W 2706 nt1.17□□□□□ -2.22
CUE1P38428 NST1YNL091W 3723 nt1.17□□□□□ -2.22
CUE1P38428 CDC36YDL165W 576 nt1.17□□□□□ -2.22
CUE1P38428 LRP1YHR081W 555 nt1.17□□□□□ -2.22
CUE1P38428 EMC5YIL027C 426 nt1.17□□□□□ -2.22
CUE1P38428 YJL047C-AYJL047C-A 135 nt1.17□□□□□ -2.22
CUE1P38428 YNL146C-AYNL146C-A 195 nt1.17□□□□□ -2.22
CUE1P38428 YPR096CYPR096C 303 nt1.17□□□□□ -2.22
CUE1P38428 SMY1YKL079W 1971 nt1.17□□□□□ -2.22
CUE1P38428 YBR012W-AYBR012W-A 1323 nt1.16□□□□□ -2.22
CUE1P38428 YOR142W-AYOR142W-A 1323 nt1.16□□□□□ -2.22
CUE1P38428 YPR158W-AYPR158W-A 1323 nt1.16□□□□□ -2.22
CUE1P38428 RSM22YKL155C 1887 nt1.16□□□□□ -2.22
CUE1P38428 MVP1YMR004W 1536 nt1.16□□□□□ -2.22
CUE1P38428 AHC1YOR023C 1701 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms