Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 ROX1YPR065W 1107 nt0.91□□□□□ -2.26
CSH1P38287 SPT7YBR081C 3999 nt0.91□□□□□ -2.26
CSH1P38287 IRR1YIL026C 3453 nt0.91□□□□□ -2.26
CSH1P38287 MSH5YDL154W 2706 nt0.9□□□□□ -2.26
CSH1P38287 YDR194W-AYDR194W-A 153 nt0.9□□□□□ -2.27
CSH1P38287 RPL22BYFL034C-A 369 nt0.9□□□□□ -2.27
CSH1P38287 RIO2YNL207W 1278 nt0.9□□□□□ -2.27
CSH1P38287 YOR161W-BYOR161W-B 261 nt0.9□□□□□ -2.27
CSH1P38287 YPL119C-AYPL119C-A 264 nt0.9□□□□□ -2.27
CSH1P38287 VAM6YDL077C 3150 nt0.9□□□□□ -2.27
CSH1P38287 GEP7YGL057C 864 nt0.89□□□□□ -2.27
CSH1P38287 YLR302CYLR302C 363 nt0.89□□□□□ -2.27
CSH1P38287 YLL054CYLL054C 2532 nt0.89□□□□□ -2.27
CSH1P38287 SIP4YJL089W 2490 nt0.88□□□□□ -2.27
CSH1P38287 VPS74YDR372C 1038 nt0.88□□□□□ -2.27
CSH1P38287 PEP8YJL053W 1140 nt0.88□□□□□ -2.27
CSH1P38287 YNL235CYNL235C 432 nt0.88□□□□□ -2.27
CSH1P38287 RTC6YPL183W-A 282 nt0.88□□□□□ -2.27
CSH1P38287 NST1YNL091W 3723 nt0.88□□□□□ -2.27
CSH1P38287 SGD1YLR336C 2700 nt0.87□□□□□ -2.27
CSH1P38287 MAK10YEL053C 2202 nt0.87□□□□□ -2.27
CSH1P38287 tV(UAC)BtV(UAC)B 74 nt0.87□□□□□ -2.27
CSH1P38287 tV(UAC)DtV(UAC)D 74 nt0.87□□□□□ -2.27
CSH1P38287 CGI121YML036W 546 nt0.87□□□□□ -2.27
CSH1P38287 NOP15YNL110C 663 nt0.87□□□□□ -2.27
CSH1P38287 PEP3YLR148W 2757 nt0.87□□□□□ -2.27
CSH1P38287 IML1YJR138W 4755 nt0.86□□□□□ -2.27
CSH1P38287 SPR3YGR059W 1539 nt0.86□□□□□ -2.27
CSH1P38287 YDL211CYDL211C 1119 nt0.86□□□□□ -2.27
CSH1P38287 SRB7YDR308C 423 nt0.86□□□□□ -2.27
CSH1P38287 RSM28YDR494W 1086 nt0.86□□□□□ -2.27
CSH1P38287 IES5YER092W 378 nt0.86□□□□□ -2.27
CSH1P38287 YBL073WYBL073W 312 nt0.86□□□□□ -2.27
CSH1P38287 YBR224WYBR224W 516 nt0.86□□□□□ -2.27
CSH1P38287 OSH6YKR003W 1347 nt0.86□□□□□ -2.27
CSH1P38287 YIR020C-BYIR020C-B 735 nt0.85□□□□□ -2.27
CSH1P38287 ABM1YJR108W 372 nt0.85□□□□□ -2.27
CSH1P38287 YLL020CYLL020C 306 nt0.85□□□□□ -2.27
CSH1P38287 GUP1YGL084C 1683 nt0.84□□□□□ -2.27
CSH1P38287 BUD26YDR241W 288 nt0.84□□□□□ -2.27
CSH1P38287 PKR1YMR123W 369 nt0.84□□□□□ -2.27
CSH1P38287 TIM18YOR297C 579 nt0.84□□□□□ -2.27
CSH1P38287 15S_rRNA15S_rRNA 1649 nt0.83□□□□□ -2.28
CSH1P38287 YGL042CYGL042C 306 nt0.83□□□□□ -2.28
CSH1P38287 PRM8YGL053W 714 nt0.83□□□□□ -2.28
CSH1P38287 YGR265WYGR265W 411 nt0.83□□□□□ -2.28
CSH1P38287 YHL009W-AYHL009W-A 1242 nt0.83□□□□□ -2.28
CSH1P38287 POL32YJR043C 1053 nt0.83□□□□□ -2.28
CSH1P38287 YPL039WYPL039W 951 nt0.83□□□□□ -2.28
CSH1P38287 ATP15YPL271W 189 nt0.83□□□□□ -2.28
CSH1P38287 DCP2YNL118C 2913 nt0.82□□□□□ -2.28
CSH1P38287 BEM2YER155C 6504 nt0.82□□□□□ -2.28
CSH1P38287 YDL068WYDL068W 330 nt0.82□□□□□ -2.28
CSH1P38287 YDR169C-AYDR169C-A 150 nt0.82□□□□□ -2.28
CSH1P38287 RNR4YGR180C 1038 nt0.82□□□□□ -2.28
CSH1P38287 URA10YMR271C 684 nt0.82□□□□□ -2.28
CSH1P38287 YPL080CYPL080C 327 nt0.82□□□□□ -2.28
CSH1P38287 YGR130CYGR130C 2451 nt0.81□□□□□ -2.28
CSH1P38287 DPB11YJL090C 2295 nt0.81□□□□□ -2.28
CSH1P38287 RAD50YNL250W 3939 nt0.81□□□□□ -2.28
CSH1P38287 SHE4YOR035C 2370 nt0.81□□□□□ -2.28
CSH1P38287 RTR2YDR066C 591 nt0.81□□□□□ -2.28
CSH1P38287 EMT1tM(CAU)D 73 nt0.81□□□□□ -2.28
CSH1P38287 EMT5tM(CAU)J1 73 nt0.81□□□□□ -2.28
CSH1P38287 EMT3tM(CAU)J2 73 nt0.81□□□□□ -2.28
CSH1P38287 EMT4tM(CAU)M 73 nt0.81□□□□□ -2.28
CSH1P38287 EMT2tM(CAU)O2 73 nt0.81□□□□□ -2.28
CSH1P38287 ANS1YHR126C 480 nt0.81□□□□□ -2.28
CSH1P38287 COX3Q0275 810 nt0.81□□□□□ -2.28
CSH1P38287 SEC22YLR268W 645 nt0.81□□□□□ -2.28
CSH1P38287 YML003WYML003W 873 nt0.81□□□□□ -2.28
CSH1P38287 YMR242W-AYMR242W-A 90 nt0.81□□□□□ -2.28
CSH1P38287 YNL114CYNL114C 372 nt0.81□□□□□ -2.28
CSH1P38287 YBR184WYBR184W 1572 nt0.81□□□□□ -2.28
CSH1P38287 SCC2YDR180W 4482 nt0.81□□□□□ -2.28
CSH1P38287 DOP1YDR141C 5097 nt0.8□□□□□ -2.28
CSH1P38287 ROM2YLR371W 4071 nt0.8□□□□□ -2.28
CSH1P38287 HTB1YDR224C 396 nt0.8□□□□□ -2.28
CSH1P38287 LOC1YFR001W 615 nt0.8□□□□□ -2.28
CSH1P38287 LSM12YHR121W 564 nt0.8□□□□□ -2.28
CSH1P38287 RPL40BYKR094C 387 nt0.8□□□□□ -2.28
CSH1P38287 RPL9BYNL067W 576 nt0.8□□□□□ -2.28
CSH1P38287 SGO1YOR073W 1773 nt0.8□□□□□ -2.28
CSH1P38287 SEF1YBL066C 3447 nt0.79□□□□□ -2.28
CSH1P38287 VPS54YDR027C 2670 nt0.79□□□□□ -2.28
CSH1P38287 YDR248CYDR248C 582 nt0.79□□□□□ -2.28
CSH1P38287 YGL217CYGL217C 342 nt0.79□□□□□ -2.28
CSH1P38287 CRG1YHR209W 876 nt0.79□□□□□ -2.28
CSH1P38287 HYM1YKL189W 1200 nt0.79□□□□□ -2.28
CSH1P38287 SPR2YOR214C 711 nt0.79□□□□□ -2.28
CSH1P38287 NUP188YML103C 4968 nt0.79□□□□□ -2.28
CSH1P38287 RPL37AYLR185W 267 nt0.78□□□□□ -2.28
CSH1P38287 NBP1YLR457C 960 nt0.78□□□□□ -2.28
CSH1P38287 HCH1YNL281W 462 nt0.78□□□□□ -2.28
CSH1P38287 TFB6YOR352W 1032 nt0.78□□□□□ -2.28
CSH1P38287 SWI4YER111C 3282 nt0.78□□□□□ -2.28
CSH1P38287 YHR214C-CYHR214C-C 1437 nt0.78□□□□□ -2.28
CSH1P38287 REF2YDR195W 1602 nt0.78□□□□□ -2.29
CSH1P38287 NUP82YJL061W 2142 nt0.77□□□□□ -2.29
CSH1P38287 SLX4YLR135W 2247 nt0.77□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms