Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.22■■□□□ 1.63
PDE6BP35913 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDE6BP35913 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDE6BP35913 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.21■■□□□ 1.63
PDE6BP35913 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDE6BP35913 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDE6BP35913 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDE6BP35913 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.21■■□□□ 1.63
PDE6BP35913 NUDT16P1-203ENST00000513809 620 ntBASIC25.21■■□□□ 1.63
PDE6BP35913 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.21■■□□□ 1.63
PDE6BP35913 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
PDE6BP35913 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.2■■□□□ 1.63
PDE6BP35913 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.2■■□□□ 1.62
PDE6BP35913 UNC93B2-201ENST00000285383 730 ntBASIC25.2■■□□□ 1.62
PDE6BP35913 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.2■■□□□ 1.62
PDE6BP35913 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.2■■□□□ 1.62
PDE6BP35913 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.2■■□□□ 1.62
PDE6BP35913 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.2■■□□□ 1.62
PDE6BP35913 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 AC079598.2-202ENST00000546624 1451 ntBASIC25.2■■□□□ 1.62
PDE6BP35913 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PDE6BP35913 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.19■■□□□ 1.62
PDE6BP35913 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.19■■□□□ 1.62
PDE6BP35913 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.19■■□□□ 1.62
PDE6BP35913 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PDE6BP35913 AC005521.1-201ENST00000393351 872 ntBASIC25.19■■□□□ 1.62
PDE6BP35913 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PDE6BP35913 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.19■■□□□ 1.62
PDE6BP35913 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.19■■□□□ 1.62
PDE6BP35913 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.19■■□□□ 1.62
PDE6BP35913 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.19■■□□□ 1.62
PDE6BP35913 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.19■■□□□ 1.62
PDE6BP35913 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.19■■□□□ 1.62
PDE6BP35913 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDE6BP35913 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDE6BP35913 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.18■■□□□ 1.62
PDE6BP35913 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.18■■□□□ 1.62
PDE6BP35913 AC004264.1-201ENST00000608354 794 ntBASIC25.18■■□□□ 1.62
PDE6BP35913 REXO1L10P-201ENST00000615707 1290 ntBASIC25.18■■□□□ 1.62
PDE6BP35913 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDE6BP35913 AC124283.5-201ENST00000624661 1809 ntBASIC25.18■■□□□ 1.62
PDE6BP35913 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.18■■□□□ 1.62
PDE6BP35913 KRT8P9-201ENST00000558927 1449 ntBASIC25.18■■□□□ 1.62
PDE6BP35913 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDE6BP35913 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.17■■□□□ 1.62
PDE6BP35913 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PDE6BP35913 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.17■■□□□ 1.62
PDE6BP35913 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.17■■□□□ 1.62
PDE6BP35913 AP000525.1-201ENST00000608286 694 ntBASIC25.17■■□□□ 1.62
PDE6BP35913 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.17■■□□□ 1.62
PDE6BP35913 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.17■■□□□ 1.62
PDE6BP35913 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE6BP35913 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.16■■□□□ 1.62
PDE6BP35913 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
PDE6BP35913 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.16■■□□□ 1.62
PDE6BP35913 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.16■■□□□ 1.62
PDE6BP35913 AL121906.2-201ENST00000621597 723 ntBASIC25.16■■□□□ 1.62
PDE6BP35913 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE6BP35913 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.16■■□□□ 1.62
PDE6BP35913 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDE6BP35913 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE6BP35913 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
PDE6BP35913 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.15■■□□□ 1.62
PDE6BP35913 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.15■■□□□ 1.62
PDE6BP35913 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.15■■□□□ 1.62
PDE6BP35913 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.15■■□□□ 1.62
PDE6BP35913 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.15■■□□□ 1.62
PDE6BP35913 AP002982.1-201ENST00000492365 877 ntBASIC25.15■■□□□ 1.62
PDE6BP35913 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE6BP35913 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PDE6BP35913 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.15■■□□□ 1.62
PDE6BP35913 AL031963.3-201ENST00000606441 850 ntBASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms