Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 YMR230W-AYMR230W-A 189 nt3.08□□□□□ -1.92
DEF1P35732 VIK1YPL253C 1944 nt3.08□□□□□ -1.92
DEF1P35732 RIM20YOR275C 1986 nt3.08□□□□□ -1.92
DEF1P35732 YHL006W-AYHL006W-A 354 nt3.07□□□□□ -1.92
DEF1P35732 YJL020W-AYJL020W-A 258 nt3.07□□□□□ -1.92
DEF1P35732 RPL32YBL092W 393 nt3.07□□□□□ -1.92
DEF1P35732 RLI1YDR091C 1827 nt3.06□□□□□ -1.92
DEF1P35732 YEL014CYEL014C 306 nt3.06□□□□□ -1.92
DEF1P35732 AIM9YER080W 1884 nt3.06□□□□□ -1.92
DEF1P35732 CYR1YJL005W 6081 nt3.06□□□□□ -1.92
DEF1P35732 NCE101YJL205C 162 nt3.06□□□□□ -1.92
DEF1P35732 PDS5YMR076C 3834 nt3.06□□□□□ -1.92
DEF1P35732 RIF1YBR275C 5751 nt3.06□□□□□ -1.92
DEF1P35732 KEL2YGR238C 2649 nt3.05□□□□□ -1.92
DEF1P35732 PAU2YEL049W 363 nt3.05□□□□□ -1.92
DEF1P35732 KTI11YBL071W-A 249 nt3.05□□□□□ -1.92
DEF1P35732 YBR178WYBR178W 375 nt3.05□□□□□ -1.92
DEF1P35732 SOK2YMR016C 2358 nt3.05□□□□□ -1.92
DEF1P35732 YIL082W-AYIL082W-A 4497 nt3.04□□□□□ -1.92
DEF1P35732 SPO14YKR031C 5052 nt3.04□□□□□ -1.92
DEF1P35732 APC9YLR102C 798 nt3.04□□□□□ -1.92
DEF1P35732 BFA1YJR053W 1725 nt3.04□□□□□ -1.92
DEF1P35732 STE23YLR389C 3084 nt3.04□□□□□ -1.92
DEF1P35732 YPR014CYPR014C 330 nt3.03□□□□□ -1.92
DEF1P35732 SIN3YOL004W 4611 nt3.03□□□□□ -1.92
DEF1P35732 NUP82YJL061W 2142 nt3.02□□□□□ -1.93
DEF1P35732 KHA1YJL094C 2622 nt3.02□□□□□ -1.93
DEF1P35732 YDL041WYDL041W 354 nt3.02□□□□□ -1.93
DEF1P35732 CCW14YLR390W-A 717 nt3.02□□□□□ -1.93
DEF1P35732 YPL182CYPL182C 384 nt3.02□□□□□ -1.93
DEF1P35732 TIM12YBR091C 330 nt3.02□□□□□ -1.93
DEF1P35732 NTO1YPR031W 2247 nt3.02□□□□□ -1.93
DEF1P35732 YCG1YDR325W 3108 nt3.02□□□□□ -1.93
DEF1P35732 ECM25YJL201W 1800 nt3.02□□□□□ -1.93
DEF1P35732 BPT1YLL015W 4680 nt3.02□□□□□ -1.93
DEF1P35732 AI2Q0055 2565 nt3.02□□□□□ -1.93
DEF1P35732 ECM21YBL101C 3354 nt3.01□□□□□ -1.93
DEF1P35732 RPA190YOR341W 4995 nt3.01□□□□□ -1.93
DEF1P35732 NMA111YNL123W 2994 nt3.01□□□□□ -1.93
DEF1P35732 snR79snR79 84 nt3.01□□□□□ -1.93
DEF1P35732 YGR164WYGR164W 336 nt3.01□□□□□ -1.93
DEF1P35732 AYR1YIL124W 894 nt3.01□□□□□ -1.93
DEF1P35732 YLR140WYLR140W 327 nt3.01□□□□□ -1.93
DEF1P35732 YPK1YKL126W 2043 nt3.01□□□□□ -1.93
DEF1P35732 MNT3YIL014W 1893 nt3.01□□□□□ -1.93
DEF1P35732 YNL034WYNL034W 1839 nt3□□□□□ -1.93
DEF1P35732 KRE33YNL132W 3171 nt3□□□□□ -1.93
DEF1P35732 snR60snR60 104 nt3□□□□□ -1.93
DEF1P35732 TIM13YGR181W 318 nt3□□□□□ -1.93
DEF1P35732 LCL2YLR104W 396 nt3□□□□□ -1.93
DEF1P35732 RPS18BYML026C 441 nt3□□□□□ -1.93
DEF1P35732 CYB5YNL111C 363 nt3□□□□□ -1.93
DEF1P35732 YBL083CYBL083C 426 nt3□□□□□ -1.93
DEF1P35732 TRA1YHR099W 11235 nt3□□□□□ -1.93
DEF1P35732 SSN2YDR443C 4263 nt2.99□□□□□ -1.93
DEF1P35732 YMR172C-AYMR172C-A 384 nt2.99□□□□□ -1.93
DEF1P35732 YPR146CYPR146C 330 nt2.99□□□□□ -1.93
DEF1P35732 FAR11YNL127W 2862 nt2.98□□□□□ -1.93
DEF1P35732 YIL058WYIL058W 285 nt2.98□□□□□ -1.93
DEF1P35732 YLR012CYLR012C 300 nt2.98□□□□□ -1.93
DEF1P35732 ECM5YMR176W 4236 nt2.97□□□□□ -1.93
DEF1P35732 MSB2YGR014W 3921 nt2.97□□□□□ -1.93
DEF1P35732 COF1YLL050C 432 nt2.97□□□□□ -1.93
DEF1P35732 RPS29AYLR388W 171 nt2.97□□□□□ -1.93
DEF1P35732 YNL010WYNL010W 726 nt2.97□□□□□ -1.93
DEF1P35732 SAR1YPL218W 573 nt2.97□□□□□ -1.93
DEF1P35732 GYP7YDL234C 2241 nt2.97□□□□□ -1.93
DEF1P35732 MET10YFR030W 3108 nt2.97□□□□□ -1.93
DEF1P35732 BIT61YJL058C 1632 nt2.97□□□□□ -1.93
DEF1P35732 YGR067CYGR067C 2415 nt2.97□□□□□ -1.93
DEF1P35732 ILS1YBL076C 3219 nt2.97□□□□□ -1.93
DEF1P35732 LEU3YLR451W 2661 nt2.96□□□□□ -1.93
DEF1P35732 BNI4YNL233W 2679 nt2.96□□□□□ -1.93
DEF1P35732 RGC1YPR115W 3252 nt2.96□□□□□ -1.94
DEF1P35732 YJL181WYJL181W 1836 nt2.96□□□□□ -1.94
DEF1P35732 CDC24YAL041W 2565 nt2.96□□□□□ -1.94
DEF1P35732 OLI1Q0130 231 nt2.96□□□□□ -1.94
DEF1P35732 YLR053CYLR053C 327 nt2.96□□□□□ -1.94
DEF1P35732 YTA7YGR270W 4140 nt2.96□□□□□ -1.94
DEF1P35732 URB2YJR041C 3525 nt2.96□□□□□ -1.94
DEF1P35732 TCB2YNL087W 3537 nt2.95□□□□□ -1.94
DEF1P35732 MRP10YDL045W-A 288 nt2.95□□□□□ -1.94
DEF1P35732 tF(GAA)QtF(GAA)Q 75 nt2.95□□□□□ -1.94
DEF1P35732 tQ(UUG)BtQ(UUG)B 72 nt2.95□□□□□ -1.94
DEF1P35732 VPS55YJR044C 423 nt2.95□□□□□ -1.94
DEF1P35732 RPL36AYMR194W 303 nt2.95□□□□□ -1.94
DEF1P35732 GYL1YMR192W 2163 nt2.95□□□□□ -1.94
DEF1P35732 TOF1YNL273W 3717 nt2.95□□□□□ -1.94
DEF1P35732 YIL166CYIL166C 1629 nt2.94□□□□□ -1.94
DEF1P35732 UBP15YMR304W 3693 nt2.94□□□□□ -1.94
DEF1P35732 VPS64YDR200C 1815 nt2.94□□□□□ -1.94
DEF1P35732 YDR524C-AYDR524C-A 120 nt2.94□□□□□ -1.94
DEF1P35732 YGL239CYGL239C 315 nt2.94□□□□□ -1.94
DEF1P35732 YHL041WYHL041W 450 nt2.94□□□□□ -1.94
DEF1P35732 YBR121C-AYBR121C-A 159 nt2.94□□□□□ -1.94
DEF1P35732 NPR1YNL183C 2373 nt2.94□□□□□ -1.94
DEF1P35732 SIP3YNL257C 3690 nt2.93□□□□□ -1.94
DEF1P35732 YKL165C-AYKL165C-A 234 nt2.93□□□□□ -1.94
DEF1P35732 YMR321CYMR321C 318 nt2.93□□□□□ -1.94
DEF1P35732 RPL25YOL127W 429 nt2.93□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 42.3 ms