Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC27■■□□□ 1.91
RXRBP28702 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC27■■□□□ 1.91
RXRBP28702 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC27■■□□□ 1.91
RXRBP28702 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27■■□□□ 1.91
RXRBP28702 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RXRBP28702 TREX2-204ENST00000370212 861 ntTSL 5 BASIC27■■□□□ 1.91
RXRBP28702 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
RXRBP28702 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC27■■□□□ 1.91
RXRBP28702 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC27■■□□□ 1.91
RXRBP28702 AC069148.1-201ENST00000608741 768 ntBASIC27■■□□□ 1.91
RXRBP28702 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC27■■□□□ 1.91
RXRBP28702 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RXRBP28702 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.99■■□□□ 1.91
RXRBP28702 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.99■■□□□ 1.91
RXRBP28702 AC137767.1-201ENST00000602918 1920 ntBASIC26.99■■□□□ 1.91
RXRBP28702 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC26.99■■□□□ 1.91
RXRBP28702 PGM5P4-201ENST00000421970 445 ntBASIC26.99■■□□□ 1.91
RXRBP28702 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.99■■□□□ 1.91
RXRBP28702 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.99■■□□□ 1.91
RXRBP28702 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RXRBP28702 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RXRBP28702 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RXRBP28702 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RXRBP28702 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
RXRBP28702 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.98■■□□□ 1.91
RXRBP28702 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RXRBP28702 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
RXRBP28702 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RXRBP28702 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.98■■□□□ 1.91
RXRBP28702 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.98■■□□□ 1.91
RXRBP28702 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.98■■□□□ 1.91
RXRBP28702 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RXRBP28702 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RXRBP28702 AC124283.5-201ENST00000624661 1809 ntBASIC26.97■■□□□ 1.91
RXRBP28702 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RXRBP28702 HMGA1P5-201ENST00000412453 271 ntBASIC26.97■■□□□ 1.91
RXRBP28702 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC26.97■■□□□ 1.91
RXRBP28702 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.97■■□□□ 1.91
RXRBP28702 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.97■■□□□ 1.91
RXRBP28702 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RXRBP28702 AC116407.4-201ENST00000623319 1061 ntBASIC26.97■■□□□ 1.91
RXRBP28702 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RXRBP28702 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RXRBP28702 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RXRBP28702 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RXRBP28702 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RXRBP28702 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
RXRBP28702 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RXRBP28702 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC26.96■■□□□ 1.91
RXRBP28702 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC26.96■■□□□ 1.91
RXRBP28702 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.96■■□□□ 1.91
RXRBP28702 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC26.96■■□□□ 1.91
RXRBP28702 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC26.96■■□□□ 1.91
RXRBP28702 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.96■■□□□ 1.91
RXRBP28702 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC26.96■■□□□ 1.91
RXRBP28702 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RXRBP28702 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.96■■□□□ 1.91
RXRBP28702 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.91
RXRBP28702 FSCN1P1-201ENST00000568912 1481 ntBASIC26.95■■□□□ 1.91
RXRBP28702 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.95■■□□□ 1.91
RXRBP28702 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.95■■□□□ 1.9
RXRBP28702 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RXRBP28702 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC26.95■■□□□ 1.9
RXRBP28702 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.95■■□□□ 1.9
RXRBP28702 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC26.95■■□□□ 1.9
RXRBP28702 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC26.95■■□□□ 1.9
RXRBP28702 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC26.95■■□□□ 1.9
RXRBP28702 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
RXRBP28702 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.95■■□□□ 1.9
RXRBP28702 AC005332.1-201ENST00000577698 1310 ntBASIC26.94■■□□□ 1.9
RXRBP28702 ABCB10P4-201ENST00000566803 2184 ntBASIC26.94■■□□□ 1.9
RXRBP28702 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RXRBP28702 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RXRBP28702 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RXRBP28702 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC26.94■■□□□ 1.9
RXRBP28702 COX11P1-201ENST00000489116 835 ntBASIC26.94■■□□□ 1.9
RXRBP28702 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC26.94■■□□□ 1.9
RXRBP28702 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.94■■□□□ 1.9
RXRBP28702 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC26.94■■□□□ 1.9
RXRBP28702 CR769767.2-201ENST00000622735 460 ntBASIC26.94■■□□□ 1.9
RXRBP28702 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.94■■□□□ 1.9
RXRBP28702 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
RXRBP28702 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.94■■□□□ 1.9
RXRBP28702 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.94■■□□□ 1.9
RXRBP28702 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC26.93■■□□□ 1.9
RXRBP28702 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
RXRBP28702 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RXRBP28702 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RXRBP28702 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.93■■□□□ 1.9
RXRBP28702 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RXRBP28702 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
RXRBP28702 MESTP1-201ENST00000404287 994 ntBASIC26.93■■□□□ 1.9
RXRBP28702 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms