Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YML099W-AYML099W-A 330 nt2.85□□□□□ -1.95
MSH2P25847 YBL073WYBL073W 312 nt2.85□□□□□ -1.95
MSH2P25847 FAR11YNL127W 2862 nt2.85□□□□□ -1.95
MSH2P25847 AIM9YER080W 1884 nt2.84□□□□□ -1.95
MSH2P25847 SMY2YBR172C 2223 nt2.84□□□□□ -1.95
MSH2P25847 YIL080WYIL080W 4722 nt2.84□□□□□ -1.95
MSH2P25847 RPS24AYER074W 408 nt2.84□□□□□ -1.95
MSH2P25847 YHL037CYHL037C 402 nt2.84□□□□□ -1.95
MSH2P25847 tW(CCA)G1tW(CCA)G1 72 nt2.84□□□□□ -1.95
MSH2P25847 tW(CCA)G2tW(CCA)G2 72 nt2.84□□□□□ -1.95
MSH2P25847 tW(CCA)JtW(CCA)J 72 nt2.84□□□□□ -1.95
MSH2P25847 MAM33YIL070C 801 nt2.84□□□□□ -1.95
MSH2P25847 tW(CCA)KtW(CCA)K 72 nt2.84□□□□□ -1.95
MSH2P25847 tW(CCA)MtW(CCA)M 72 nt2.84□□□□□ -1.95
MSH2P25847 tW(CCA)PtW(CCA)P 72 nt2.84□□□□□ -1.95
MSH2P25847 YKL083WYKL083W 615 nt2.84□□□□□ -1.95
MSH2P25847 RTT10YPL183C 3042 nt2.84□□□□□ -1.96
MSH2P25847 YNL018CYNL018C 1839 nt2.84□□□□□ -1.96
MSH2P25847 DOT6YER088C 2013 nt2.83□□□□□ -1.96
MSH2P25847 PFF1YBR074W 2931 nt2.83□□□□□ -1.96
MSH2P25847 YDL152WYDL152W 366 nt2.83□□□□□ -1.96
MSH2P25847 ERP6YGL002W 651 nt2.83□□□□□ -1.96
MSH2P25847 TIM13YGR181W 318 nt2.83□□□□□ -1.96
MSH2P25847 YIL115W-AYIL115W-A 372 nt2.83□□□□□ -1.96
MSH2P25847 YJL020W-AYJL020W-A 258 nt2.83□□□□□ -1.96
MSH2P25847 YMR193C-AYMR193C-A 387 nt2.83□□□□□ -1.96
MSH2P25847 TIM18YOR297C 579 nt2.83□□□□□ -1.96
MSH2P25847 AFI1YOR129C 2682 nt2.83□□□□□ -1.96
MSH2P25847 TRS130YMR218C 3309 nt2.83□□□□□ -1.96
MSH2P25847 DNA2YHR164C 4569 nt2.83□□□□□ -1.96
MSH2P25847 SWA2YDR320C 2007 nt2.82□□□□□ -1.96
MSH2P25847 tW(UCA)QtW(UCA)Q 74 nt2.82□□□□□ -1.96
MSH2P25847 LCL1YPL056C 306 nt2.82□□□□□ -1.96
MSH2P25847 YBR085C-AYBR085C-A 258 nt2.82□□□□□ -1.96
MSH2P25847 TUS1YLR425W 3924 nt2.82□□□□□ -1.96
MSH2P25847 BCK1YJL095W 4437 nt2.82□□□□□ -1.96
MSH2P25847 DIS3YOL021C 3006 nt2.82□□□□□ -1.96
MSH2P25847 NHP2YDL208W 471 nt2.81□□□□□ -1.96
MSH2P25847 YDR102CYDR102C 333 nt2.81□□□□□ -1.96
MSH2P25847 YDR413CYDR413C 576 nt2.81□□□□□ -1.96
MSH2P25847 HSK3YKL138C-A 210 nt2.81□□□□□ -1.96
MSH2P25847 YPL229WYPL229W 621 nt2.81□□□□□ -1.96
MSH2P25847 snR43snR43 209 nt2.81□□□□□ -1.96
MSH2P25847 CYR1YJL005W 6081 nt2.81□□□□□ -1.96
MSH2P25847 RIC1YLR039C 3171 nt2.8□□□□□ -1.96
MSH2P25847 YDR209CYDR209C 414 nt2.8□□□□□ -1.96
MSH2P25847 SNC1YAL030W 354 nt2.8□□□□□ -1.96
MSH2P25847 RPS27AYKL156W 249 nt2.8□□□□□ -1.96
MSH2P25847 YMR031W-AYMR031W-A 327 nt2.8□□□□□ -1.96
MSH2P25847 YPR099CYPR099C 357 nt2.8□□□□□ -1.96
MSH2P25847 MRD1YPR112C 2664 nt2.8□□□□□ -1.96
MSH2P25847 CRM1YGR218W 3255 nt2.8□□□□□ -1.96
MSH2P25847 BNR1YIL159W 4128 nt2.79□□□□□ -1.96
MSH2P25847 YER181CYER181C 324 nt2.79□□□□□ -1.96
MSH2P25847 TWF1YGR080W 999 nt2.79□□□□□ -1.96
MSH2P25847 PSY1YKL076C 384 nt2.79□□□□□ -1.96
MSH2P25847 YML037CYML037C 1023 nt2.79□□□□□ -1.96
MSH2P25847 KRE33YNL132W 3171 nt2.79□□□□□ -1.96
MSH2P25847 YKU80YMR106C 1890 nt2.78□□□□□ -1.96
MSH2P25847 RPS22AYJL190C 393 nt2.78□□□□□ -1.96
MSH2P25847 HCH1YNL281W 462 nt2.78□□□□□ -1.96
MSH2P25847 GUP1YGL084C 1683 nt2.78□□□□□ -1.96
MSH2P25847 YDR098C-BYDR098C-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YDR210C-DYDR210C-D 5268 nt2.77□□□□□ -1.97
MSH2P25847 YDR316W-BYDR316W-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YDR365W-BYDR365W-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YER138CYER138C 5268 nt2.77□□□□□ -1.97
MSH2P25847 YER160CYER160C 5268 nt2.77□□□□□ -1.97
MSH2P25847 YGR038C-BYGR038C-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YGR161C-DYGR161C-D 5268 nt2.77□□□□□ -1.97
MSH2P25847 YJR027WYJR027W 5268 nt2.77□□□□□ -1.97
MSH2P25847 YLR157C-BYLR157C-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YML039WYML039W 5268 nt2.77□□□□□ -1.97
MSH2P25847 YML045WYML045W 5268 nt2.77□□□□□ -1.97
MSH2P25847 YMR050CYMR050C 5268 nt2.77□□□□□ -1.97
MSH2P25847 YOL103W-BYOL103W-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YBR012W-BYBR012W-B 5271 nt2.77□□□□□ -1.97
MSH2P25847 YOR142W-BYOR142W-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YPL257W-BYPL257W-B 5268 nt2.77□□□□□ -1.97
MSH2P25847 YPR158W-BYPR158W-B 5271 nt2.77□□□□□ -1.97
MSH2P25847 YER097WYER097W 330 nt2.77□□□□□ -1.97
MSH2P25847 RPL14BYHL001W 417 nt2.77□□□□□ -1.97
MSH2P25847 EMC6YLL014W 327 nt2.77□□□□□ -1.97
MSH2P25847 VMA9YCL005W-A 222 nt2.77□□□□□ -1.97
MSH2P25847 YBP1YBR216C 2025 nt2.76□□□□□ -1.97
MSH2P25847 ORC2YBR060C 1863 nt2.76□□□□□ -1.97
MSH2P25847 YBL005W-BYBL005W-B 5268 nt2.76□□□□□ -1.97
MSH2P25847 YIL174WYIL174W 228 nt2.76□□□□□ -1.97
MSH2P25847 YJL222W-AYJL222W-A 228 nt2.76□□□□□ -1.97
MSH2P25847 YMR320WYMR320W 306 nt2.76□□□□□ -1.97
MSH2P25847 SMY1YKL079W 1971 nt2.76□□□□□ -1.97
MSH2P25847 TOF2YKR010C 2316 nt2.75□□□□□ -1.97
MSH2P25847 SEC26YDR238C 2922 nt2.75□□□□□ -1.97
MSH2P25847 YGL069CYGL069C 465 nt2.75□□□□□ -1.97
MSH2P25847 snR36snR36 182 nt2.75□□□□□ -1.97
MSH2P25847 CDC53YDL132W 2448 nt2.75□□□□□ -1.97
MSH2P25847 SNF5YBR289W 2718 nt2.75□□□□□ -1.97
MSH2P25847 CDC27YBL084C 2277 nt2.75□□□□□ -1.97
MSH2P25847 PAN3YKL025C 2040 nt2.75□□□□□ -1.97
MSH2P25847 NUP100YKL068W 2880 nt2.75□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 52 ms