Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.78■□□□□ 0.6
NR4A1P22736 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 AC012414.1-201ENST00000556676 535 ntBASIC18.78■□□□□ 0.6
NR4A1P22736 AC105233.4-201ENST00000642045 216 ntBASIC18.78■□□□□ 0.6
NR4A1P22736 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
NR4A1P22736 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
NR4A1P22736 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NR4A1P22736 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.77■□□□□ 0.6
NR4A1P22736 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NR4A1P22736 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.77■□□□□ 0.6
NR4A1P22736 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.77■□□□□ 0.6
NR4A1P22736 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.77■□□□□ 0.6
NR4A1P22736 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
NR4A1P22736 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR4A1P22736 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.77■□□□□ 0.6
NR4A1P22736 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.77■□□□□ 0.6
NR4A1P22736 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NR4A1P22736 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NR4A1P22736 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NR4A1P22736 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NR4A1P22736 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NR4A1P22736 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
NR4A1P22736 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
NR4A1P22736 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NR4A1P22736 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.76■□□□□ 0.59
NR4A1P22736 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.76■□□□□ 0.59
NR4A1P22736 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.76■□□□□ 0.59
NR4A1P22736 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.76■□□□□ 0.59
NR4A1P22736 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.76■□□□□ 0.59
NR4A1P22736 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.76■□□□□ 0.59
NR4A1P22736 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.76■□□□□ 0.59
NR4A1P22736 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NR4A1P22736 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR4A1P22736 BX323043.1-201ENST00000641006 1765 ntBASIC18.76■□□□□ 0.59
NR4A1P22736 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.75■□□□□ 0.59
NR4A1P22736 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NR4A1P22736 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.75■□□□□ 0.59
NR4A1P22736 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.75■□□□□ 0.59
NR4A1P22736 RARRES2P6-201ENST00000567333 442 ntBASIC18.75■□□□□ 0.59
NR4A1P22736 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.75■□□□□ 0.59
NR4A1P22736 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NR4A1P22736 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.75■□□□□ 0.59
NR4A1P22736 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NR4A1P22736 AL162377.1-201ENST00000618844 1793 ntBASIC18.75■□□□□ 0.59
NR4A1P22736 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR4A1P22736 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.74■□□□□ 0.59
NR4A1P22736 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
NR4A1P22736 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.74■□□□□ 0.59
NR4A1P22736 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.74■□□□□ 0.59
NR4A1P22736 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.74■□□□□ 0.59
NR4A1P22736 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.74■□□□□ 0.59
NR4A1P22736 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.74■□□□□ 0.59
NR4A1P22736 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.74■□□□□ 0.59
NR4A1P22736 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.74■□□□□ 0.59
NR4A1P22736 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.74■□□□□ 0.59
NR4A1P22736 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR4A1P22736 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms