Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
RCC1P18754 DUX4L6-201ENST00000626483 1275 ntBASIC17.13■□□□□ 0.33
RCC1P18754 DUX4L1-201ENST00000627662 1275 ntBASIC17.13■□□□□ 0.33
RCC1P18754 DUX4L8-201ENST00000629013 1275 ntBASIC17.13■□□□□ 0.33
RCC1P18754 DUX4L3-201ENST00000630187 1275 ntBASIC17.13■□□□□ 0.33
RCC1P18754 DUX4L7-201ENST00000630678 1275 ntBASIC17.13■□□□□ 0.33
RCC1P18754 DUX4L5-201ENST00000630834 1275 ntBASIC17.13■□□□□ 0.33
RCC1P18754 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCC1P18754 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCC1P18754 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCC1P18754 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCC1P18754 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RCC1P18754 AC112907.3-201ENST00000577781 2400 ntBASIC17.12■□□□□ 0.33
RCC1P18754 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RCC1P18754 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.12■□□□□ 0.33
RCC1P18754 YBX1P1-201ENST00000445822 960 ntBASIC17.12■□□□□ 0.33
RCC1P18754 AP001160.3-201ENST00000601484 763 ntBASIC17.12■□□□□ 0.33
RCC1P18754 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCC1P18754 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RCC1P18754 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.12■□□□□ 0.33
RCC1P18754 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RCC1P18754 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RCC1P18754 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.11■□□□□ 0.33
RCC1P18754 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.11■□□□□ 0.33
RCC1P18754 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.11■□□□□ 0.33
RCC1P18754 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.11■□□□□ 0.33
RCC1P18754 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.11■□□□□ 0.33
RCC1P18754 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RCC1P18754 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.11■□□□□ 0.33
RCC1P18754 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.11■□□□□ 0.33
RCC1P18754 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCC1P18754 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.1■□□□□ 0.33
RCC1P18754 AC026471.1-201ENST00000564629 3026 ntBASIC17.1■□□□□ 0.33
RCC1P18754 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.1■□□□□ 0.33
RCC1P18754 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.1■□□□□ 0.33
RCC1P18754 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RCC1P18754 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.1■□□□□ 0.33
RCC1P18754 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.1■□□□□ 0.33
RCC1P18754 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.1■□□□□ 0.33
RCC1P18754 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.1■□□□□ 0.33
RCC1P18754 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.1■□□□□ 0.33
RCC1P18754 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.1■□□□□ 0.33
RCC1P18754 CCDC92B-201ENST00000575506 885 ntBASIC17.1■□□□□ 0.33
RCC1P18754 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RCC1P18754 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RCC1P18754 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCC1P18754 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RCC1P18754 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.09■□□□□ 0.33
RCC1P18754 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.09■□□□□ 0.33
RCC1P18754 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.09■□□□□ 0.33
RCC1P18754 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.09■□□□□ 0.33
RCC1P18754 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.09■□□□□ 0.33
RCC1P18754 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.09■□□□□ 0.33
RCC1P18754 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RCC1P18754 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.09■□□□□ 0.33
RCC1P18754 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.09■□□□□ 0.33
RCC1P18754 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.09■□□□□ 0.33
RCC1P18754 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms