Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PRKCAP17252 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PRKCAP17252 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
PRKCAP17252 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRKCAP17252 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PRKCAP17252 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.73■□□□□ 0.59
PRKCAP17252 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRKCAP17252 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
PRKCAP17252 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PRKCAP17252 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.73■□□□□ 0.59
PRKCAP17252 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.73■□□□□ 0.59
PRKCAP17252 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.73■□□□□ 0.59
PRKCAP17252 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.73■□□□□ 0.59
PRKCAP17252 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 AC080038.1-201ENST00000611274 1154 ntBASIC18.73■□□□□ 0.59
PRKCAP17252 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.73■□□□□ 0.59
PRKCAP17252 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKCAP17252 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRKCAP17252 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PRKCAP17252 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PRKCAP17252 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PRKCAP17252 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PRKCAP17252 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.72■□□□□ 0.59
PRKCAP17252 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKCAP17252 AC092666.2-201ENST00000613287 246 ntBASIC18.72■□□□□ 0.59
PRKCAP17252 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKCAP17252 AC231657.2-201ENST00000624556 255 ntBASIC18.72■□□□□ 0.59
PRKCAP17252 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.72■□□□□ 0.59
PRKCAP17252 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKCAP17252 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKCAP17252 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PRKCAP17252 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKCAP17252 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.71■□□□□ 0.59
PRKCAP17252 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.71■□□□□ 0.59
PRKCAP17252 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PRKCAP17252 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 AC006128.1-201ENST00000624704 1661 ntBASIC18.71■□□□□ 0.59
PRKCAP17252 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 AC007322.3-201ENST00000426526 701 ntBASIC18.71■□□□□ 0.59
PRKCAP17252 CDV3P1-201ENST00000471403 739 ntBASIC18.71■□□□□ 0.59
PRKCAP17252 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.71■□□□□ 0.59
PRKCAP17252 AL591742.1-201ENST00000604433 565 ntBASIC18.71■□□□□ 0.59
PRKCAP17252 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKCAP17252 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKCAP17252 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
PRKCAP17252 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRKCAP17252 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 AC087289.5-201ENST00000586076 3175 ntBASIC18.7■□□□□ 0.58
PRKCAP17252 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRKCAP17252 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.7■□□□□ 0.58
PRKCAP17252 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKCAP17252 AL162412.1-201ENST00000567129 965 ntBASIC18.7■□□□□ 0.58
PRKCAP17252 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.7■□□□□ 0.58
PRKCAP17252 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms