Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.16■□□□□ 0.66
NCK1P16333 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NCK1P16333 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NCK1P16333 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.16■□□□□ 0.66
NCK1P16333 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
NCK1P16333 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
NCK1P16333 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NCK1P16333 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCK1P16333 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.15■□□□□ 0.66
NCK1P16333 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NCK1P16333 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.15■□□□□ 0.66
NCK1P16333 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.15■□□□□ 0.66
NCK1P16333 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCK1P16333 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCK1P16333 RARRES2P11-201ENST00000635158 484 ntBASIC19.15■□□□□ 0.66
NCK1P16333 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NCK1P16333 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.15■□□□□ 0.66
NCK1P16333 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.15■□□□□ 0.66
NCK1P16333 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCK1P16333 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCK1P16333 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NCK1P16333 AP000974.1-201ENST00000623909 2387 ntBASIC19.14■□□□□ 0.66
NCK1P16333 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NCK1P16333 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NCK1P16333 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.14■□□□□ 0.65
NCK1P16333 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.14■□□□□ 0.65
NCK1P16333 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.14■□□□□ 0.65
NCK1P16333 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NCK1P16333 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.14■□□□□ 0.65
NCK1P16333 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
NCK1P16333 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCK1P16333 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.14■□□□□ 0.65
NCK1P16333 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.13■□□□□ 0.65
NCK1P16333 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.13■□□□□ 0.65
NCK1P16333 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.13■□□□□ 0.65
NCK1P16333 MIR2861-201ENST00000636310 90 ntBASIC19.13■□□□□ 0.65
NCK1P16333 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.13■□□□□ 0.65
NCK1P16333 AC135279.3-201ENST00000610945 1311 ntBASIC19.13■□□□□ 0.65
NCK1P16333 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.13■□□□□ 0.65
NCK1P16333 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
NCK1P16333 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.13■□□□□ 0.65
NCK1P16333 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.13■□□□□ 0.65
NCK1P16333 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NCK1P16333 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NCK1P16333 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NCK1P16333 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.12■□□□□ 0.65
NCK1P16333 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NCK1P16333 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.12■□□□□ 0.65
NCK1P16333 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NCK1P16333 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.12■□□□□ 0.65
NCK1P16333 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.12■□□□□ 0.65
NCK1P16333 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NCK1P16333 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.12■□□□□ 0.65
NCK1P16333 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NCK1P16333 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.12■□□□□ 0.65
NCK1P16333 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms