Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 AC142381.2-201ENST00000566120 298 ntBASIC17.37■□□□□ 0.37
VSIG8P0DPA2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 AL358852.1-201ENST00000623174 1268 ntBASIC17.37■□□□□ 0.37
VSIG8P0DPA2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 AC116562.4-201ENST00000641316 2276 ntBASIC17.37■□□□□ 0.37
VSIG8P0DPA2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSIG8P0DPA2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.36■□□□□ 0.37
VSIG8P0DPA2 MIR6084-201ENST00000622012 110 ntBASIC17.36■□□□□ 0.37
VSIG8P0DPA2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.36■□□□□ 0.37
VSIG8P0DPA2 AL158211.5-201ENST00000623583 2518 ntBASIC17.36■□□□□ 0.37
VSIG8P0DPA2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 AC010141.2-201ENST00000452426 721 ntBASIC17.35■□□□□ 0.37
VSIG8P0DPA2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
VSIG8P0DPA2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSIG8P0DPA2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSIG8P0DPA2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms