Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YJL070CYJL070C 2667 nt3.75□□□□□ -1.81
TY1A-LR1P0CX68 MNN4YKL201C 3537 nt3.75□□□□□ -1.81
TY1A-LR1P0CX68 YDL196WYDL196W 330 nt3.75□□□□□ -1.81
TY1A-LR1P0CX68 SNA2YDR525W-A 240 nt3.75□□□□□ -1.81
TY1A-LR1P0CX68 ATP7YKL016C 525 nt3.75□□□□□ -1.81
TY1A-LR1P0CX68 GRR1YJR090C 3456 nt3.74□□□□□ -1.81
TY1A-LR1P0CX68 PHD1YKL043W 1101 nt3.74□□□□□ -1.81
TY1A-LR1P0CX68 FLO10YKR102W 3510 nt3.74□□□□□ -1.81
TY1A-LR1P0CX68 RPB2YOR151C 3675 nt3.74□□□□□ -1.81
TY1A-LR1P0CX68 APL4YPR029C 2499 nt3.74□□□□□ -1.81
TY1A-LR1P0CX68 snR43snR43 209 nt3.74□□□□□ -1.81
TY1A-LR1P0CX68 SPT16YGL207W 3108 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 SOM1YEL059C-A 225 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YER039C-AYER039C-A 219 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YDR210W-BYDR210W-B 5313 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YDR261W-BYDR261W-B 5313 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YFL002W-AYFL002W-A 5313 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YGR161W-BYGR161W-B 5313 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YLR410W-BYLR410W-B 5313 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 YCL019WYCL019W 5313 nt3.73□□□□□ -1.81
TY1A-LR1P0CX68 MIS1YBR084W 2928 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 SWI6YLR182W 2412 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 FIG4YNL325C 2640 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 SPT23YKL020C 3249 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 YFR012W-AYFR012W-A 87 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 STF2YGR008C 255 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 RPL33AYPL143W 324 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 YPR169W-AYPR169W-A 219 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 YPR170W-BYPR170W-B 258 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 YCL046WYCL046W 324 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 VPS53YJL029C 2469 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 TCO89YPL180W 2400 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 YLR149CYLR149C 2193 nt3.72□□□□□ -1.81
TY1A-LR1P0CX68 YDL025W-AYDL025W-A 105 nt3.71□□□□□ -1.82
TY1A-LR1P0CX68 YGL140CYGL140C 3660 nt3.71□□□□□ -1.82
TY1A-LR1P0CX68 PHO81YGR233C 3537 nt3.71□□□□□ -1.82
TY1A-LR1P0CX68 CTF4YPR135W 2784 nt3.7□□□□□ -1.82
TY1A-LR1P0CX68 YGR051CYGR051C 324 nt3.7□□□□□ -1.82
TY1A-LR1P0CX68 YPL044CYPL044C 549 nt3.7□□□□□ -1.82
TY1A-LR1P0CX68 ITC1YGL133W 3795 nt3.7□□□□□ -1.82
TY1A-LR1P0CX68 VBA4YDR119W 2307 nt3.7□□□□□ -1.82
TY1A-LR1P0CX68 EMC1YCL045C 2283 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 MSC6YOR354C 2079 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 NOP4YPL043W 2058 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 SNF5YBR289W 2718 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 ATG13YPR185W 2217 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 YLL019W-AYLL019W-A 93 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 YBR141W-AYBR141W-A 96 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 XRN1YGL173C 4587 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 KAP95YLR347C 2586 nt3.69□□□□□ -1.82
TY1A-LR1P0CX68 YNL144CYNL144C 2223 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 LYP1YNL268W 1836 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 MPH1YIR002C 2982 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 NUP120YKL057C 3114 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 FAP7YDL166C 594 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 HMG1YML075C 3165 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 RPN2YIL075C 2838 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 SIZ1YDR409W 2715 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 YDR239CYDR239C 2364 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 SLY1YDR189W 2001 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 PBY1YBR094W 2262 nt3.68□□□□□ -1.82
TY1A-LR1P0CX68 SEF1YBL066C 3447 nt3.67□□□□□ -1.82
TY1A-LR1P0CX68 PXA2YKL188C 2562 nt3.67□□□□□ -1.82
TY1A-LR1P0CX68 AIM44YPL158C 2277 nt3.67□□□□□ -1.82
TY1A-LR1P0CX68 YBL012CYBL012C 402 nt3.67□□□□□ -1.82
TY1A-LR1P0CX68 MYO5YMR109W 3660 nt3.67□□□□□ -1.82
TY1A-LR1P0CX68 RFX1YLR176C 2436 nt3.66□□□□□ -1.82
TY1A-LR1P0CX68 FAS2YPL231W 5664 nt3.66□□□□□ -1.82
TY1A-LR1P0CX68 snR62snR62 100 nt3.66□□□□□ -1.82
TY1A-LR1P0CX68 tL(UAA)QtL(UAA)Q 85 nt3.66□□□□□ -1.82
TY1A-LR1P0CX68 TAF6YGL112C 1551 nt3.66□□□□□ -1.82
TY1A-LR1P0CX68 ORC1YML065W 2745 nt3.66□□□□□ -1.82
TY1A-LR1P0CX68 SMY1YKL079W 1971 nt3.65□□□□□ -1.82
TY1A-LR1P0CX68 EPL1YFL024C 2499 nt3.65□□□□□ -1.82
TY1A-LR1P0CX68 COA3YJL062W-A 258 nt3.65□□□□□ -1.83
TY1A-LR1P0CX68 EDS1YBR033W 2760 nt3.65□□□□□ -1.83
TY1A-LR1P0CX68 YTA7YGR270W 4140 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 BOI1YBL085W 2943 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 HOS4YIL112W 3252 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 SPO75YLL005C 2607 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 VPS3YDR495C 3036 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 YHR032W-AYHR032W-A 180 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 YFR016CYFR016C 3702 nt3.64□□□□□ -1.83
TY1A-LR1P0CX68 CHO2YGR157W 2610 nt3.63□□□□□ -1.83
TY1A-LR1P0CX68 PFF1YBR074W 2931 nt3.63□□□□□ -1.83
TY1A-LR1P0CX68 RPL31AYDL075W 342 nt3.63□□□□□ -1.83
TY1A-LR1P0CX68 FMP16YDR070C 282 nt3.63□□□□□ -1.83
TY1A-LR1P0CX68 SAP4YGL229C 2457 nt3.63□□□□□ -1.83
TY1A-LR1P0CX68 MLH2YLR035C 2088 nt3.63□□□□□ -1.83
TY1A-LR1P0CX68 NIP100YPL174C 2607 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 SEG1YMR086W 2883 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 SAK1YER129W 3429 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 PEP3YLR148W 2757 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 YDL118WYDL118W 381 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 RPL14AYKL006W 417 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 CDC31YOR257W 486 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 YOR318CYOR318C 306 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 RPS12YOR369C 432 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 VPS35YJL154C 2835 nt3.62□□□□□ -1.83
TY1A-LR1P0CX68 AI2Q0055 2565 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 70.8 ms