Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.68■■□□□ 1.06
FAM228BP0C875 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.68■■□□□ 1.06
FAM228BP0C875 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.68■■□□□ 1.06
FAM228BP0C875 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.67■■□□□ 1.06
FAM228BP0C875 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
FAM228BP0C875 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
FAM228BP0C875 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM228BP0C875 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
FAM228BP0C875 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
FAM228BP0C875 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
FAM228BP0C875 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM228BP0C875 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FAM228BP0C875 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM228BP0C875 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.66■■□□□ 1.06
FAM228BP0C875 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.66■■□□□ 1.06
FAM228BP0C875 UBE2DNL-204ENST00000602536 740 ntBASIC21.66■■□□□ 1.06
FAM228BP0C875 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM228BP0C875 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.66■■□□□ 1.06
FAM228BP0C875 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM228BP0C875 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.66■■□□□ 1.06
FAM228BP0C875 DPP3P2-201ENST00000416030 1696 ntBASIC21.66■■□□□ 1.06
FAM228BP0C875 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
FAM228BP0C875 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM228BP0C875 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FAM228BP0C875 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM228BP0C875 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM228BP0C875 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM228BP0C875 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.65■■□□□ 1.06
FAM228BP0C875 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM228BP0C875 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.65■■□□□ 1.06
FAM228BP0C875 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.65■■□□□ 1.06
FAM228BP0C875 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.65■■□□□ 1.06
FAM228BP0C875 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM228BP0C875 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
FAM228BP0C875 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.64■■□□□ 1.05
FAM228BP0C875 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 KRT19P1-201ENST00000405746 1186 ntBASIC21.64■■□□□ 1.05
FAM228BP0C875 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
FAM228BP0C875 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.64■■□□□ 1.05
FAM228BP0C875 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
FAM228BP0C875 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
FAM228BP0C875 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM228BP0C875 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.64■■□□□ 1.05
FAM228BP0C875 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM228BP0C875 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
FAM228BP0C875 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
FAM228BP0C875 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
FAM228BP0C875 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM228BP0C875 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FAM228BP0C875 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
FAM228BP0C875 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.63■■□□□ 1.05
FAM228BP0C875 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.63■■□□□ 1.05
FAM228BP0C875 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
FAM228BP0C875 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
FAM228BP0C875 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM228BP0C875 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM228BP0C875 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM228BP0C875 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.62■■□□□ 1.05
FAM228BP0C875 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms