Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCL1P09341 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CXCL1P09341 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CXCL1P09341 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCL1P09341 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.74■□□□□ 0.11
CXCL1P09341 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CXCL1P09341 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CXCL1P09341 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CXCL1P09341 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.74■□□□□ 0.11
CXCL1P09341 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 AL138781.2-201ENST00000617896 1843 ntBASIC15.73■□□□□ 0.11
CXCL1P09341 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.73■□□□□ 0.11
CXCL1P09341 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.73■□□□□ 0.11
CXCL1P09341 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CXCL1P09341 AC012354.3-201ENST00000623734 483 ntBASIC15.73■□□□□ 0.11
CXCL1P09341 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.73■□□□□ 0.11
CXCL1P09341 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.73■□□□□ 0.11
CXCL1P09341 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CXCL1P09341 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CXCL1P09341 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CXCL1P09341 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCL1P09341 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 AC106820.2-201ENST00000563775 3264 ntBASIC15.72■□□□□ 0.11
CXCL1P09341 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CXCL1P09341 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.72■□□□□ 0.11
CXCL1P09341 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 MTDHP2-201ENST00000601468 714 ntBASIC15.72■□□□□ 0.11
CXCL1P09341 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CXCL1P09341 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCL1P09341 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.72■□□□□ 0.11
CXCL1P09341 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CXCL1P09341 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CXCL1P09341 FP700111.2-201ENST00000619190 1892 ntBASIC15.71■□□□□ 0.11
CXCL1P09341 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.71■□□□□ 0.11
CXCL1P09341 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CXCL1P09341 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.71■□□□□ 0.11
CXCL1P09341 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
CXCL1P09341 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.71■□□□□ 0.11
CXCL1P09341 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CXCL1P09341 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.71■□□□□ 0.11
CXCL1P09341 AC241377.3-202ENST00000626088 1088 ntBASIC15.71■□□□□ 0.11
CXCL1P09341 AC241585.3-202ENST00000628937 1088 ntBASIC15.71■□□□□ 0.11
CXCL1P09341 AC245100.8-202ENST00000629247 1058 ntBASIC15.71■□□□□ 0.11
CXCL1P09341 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.71■□□□□ 0.11
CXCL1P09341 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCL1P09341 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.71■□□□□ 0.11
CXCL1P09341 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCL1P09341 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CXCL1P09341 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.71■□□□□ 0.1
CXCL1P09341 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CXCL1P09341 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CXCL1P09341 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CXCL1P09341 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CXCL1P09341 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL1P09341 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL1P09341 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms