Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HTR1AP08908 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HTR1AP08908 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
HTR1AP08908 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HTR1AP08908 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HTR1AP08908 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HTR1AP08908 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.52■□□□□ 0.55
HTR1AP08908 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.52■□□□□ 0.55
HTR1AP08908 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HTR1AP08908 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HTR1AP08908 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HTR1AP08908 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.51■□□□□ 0.55
HTR1AP08908 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HTR1AP08908 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.51■□□□□ 0.55
HTR1AP08908 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HTR1AP08908 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.51■□□□□ 0.55
HTR1AP08908 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HTR1AP08908 SLC47A1P1-202ENST00000449666 945 ntBASIC18.51■□□□□ 0.55
HTR1AP08908 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.51■□□□□ 0.55
HTR1AP08908 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.51■□□□□ 0.55
HTR1AP08908 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.51■□□□□ 0.55
HTR1AP08908 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.51■□□□□ 0.55
HTR1AP08908 AC136469.2-201ENST00000623944 1028 ntBASIC18.51■□□□□ 0.55
HTR1AP08908 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.51■□□□□ 0.55
HTR1AP08908 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HTR1AP08908 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.51■□□□□ 0.55
HTR1AP08908 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HTR1AP08908 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
HTR1AP08908 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HTR1AP08908 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HTR1AP08908 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTR1AP08908 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
HTR1AP08908 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
HTR1AP08908 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 AC011298.3-201ENST00000615796 283 ntBASIC18.49■□□□□ 0.55
HTR1AP08908 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.49■□□□□ 0.55
HTR1AP08908 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.49■□□□□ 0.55
HTR1AP08908 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.49■□□□□ 0.55
HTR1AP08908 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.49■□□□□ 0.55
HTR1AP08908 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
HTR1AP08908 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTR1AP08908 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 AC005082.1-201ENST00000413042 2259 ntBASIC18.48■□□□□ 0.55
HTR1AP08908 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.48■□□□□ 0.55
HTR1AP08908 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.48■□□□□ 0.55
HTR1AP08908 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.48■□□□□ 0.55
HTR1AP08908 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.48■□□□□ 0.55
HTR1AP08908 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.48■□□□□ 0.55
HTR1AP08908 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.48■□□□□ 0.55
HTR1AP08908 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HTR1AP08908 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1AP08908 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1AP08908 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HTR1AP08908 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.47■□□□□ 0.55
HTR1AP08908 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms