Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC105233.4-201ENST00000642045 216 ntBASIC16.85■□□□□ 0.29
CTSDP07339 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTSDP07339 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.85■□□□□ 0.29
CTSDP07339 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.85■□□□□ 0.29
CTSDP07339 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CTSDP07339 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CTSDP07339 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.84■□□□□ 0.29
CTSDP07339 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CTSDP07339 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CTSDP07339 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.84■□□□□ 0.29
CTSDP07339 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 AP000974.1-201ENST00000623909 2387 ntBASIC16.84■□□□□ 0.29
CTSDP07339 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CTSDP07339 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CTSDP07339 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.84■□□□□ 0.29
CTSDP07339 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.84■□□□□ 0.29
CTSDP07339 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.84■□□□□ 0.29
CTSDP07339 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.84■□□□□ 0.29
CTSDP07339 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.84■□□□□ 0.29
CTSDP07339 TNXA-203ENST00000507684 2038 ntBASIC16.84■□□□□ 0.29
CTSDP07339 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSDP07339 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CTSDP07339 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CTSDP07339 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.83■□□□□ 0.28
CTSDP07339 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 AL136116.3-201ENST00000402907 1138 ntBASIC16.83■□□□□ 0.28
CTSDP07339 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.83■□□□□ 0.28
CTSDP07339 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.83■□□□□ 0.28
CTSDP07339 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSDP07339 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSDP07339 AC008406.3-201ENST00000620001 1374 ntBASIC16.83■□□□□ 0.28
CTSDP07339 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CTSDP07339 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSDP07339 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTSDP07339 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSDP07339 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTSDP07339 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CTSDP07339 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSDP07339 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTSDP07339 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 POU5F1P4-201ENST00000413175 1085 ntBASIC16.82■□□□□ 0.28
CTSDP07339 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 MIR4767-201ENST00000582827 78 ntBASIC16.82■□□□□ 0.28
CTSDP07339 AC008175.2-201ENST00000612840 297 ntBASIC16.82■□□□□ 0.28
CTSDP07339 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSDP07339 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CTSDP07339 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSDP07339 AC005332.7-201ENST00000614046 2005 ntBASIC16.82■□□□□ 0.28
CTSDP07339 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSDP07339 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSDP07339 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTSDP07339 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.81■□□□□ 0.28
CTSDP07339 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSDP07339 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 RARRES2P11-201ENST00000635158 484 ntBASIC16.81■□□□□ 0.28
CTSDP07339 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSDP07339 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSDP07339 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms