Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04436 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04436 KRT18P29-201ENST00000397031 1267 ntBASIC18.58■□□□□ 0.56
P04436 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P04436 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
P04436 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04436 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
P04436 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04436 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
P04436 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P04436 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.57■□□□□ 0.56
P04436 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.57■□□□□ 0.56
P04436 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.57■□□□□ 0.56
P04436 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 AP003097.1-201ENST00000530657 1135 ntBASIC18.57■□□□□ 0.56
P04436 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.57■□□□□ 0.56
P04436 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.57■□□□□ 0.56
P04436 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.57■□□□□ 0.56
P04436 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.57■□□□□ 0.56
P04436 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P04436 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
P04436 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04436 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
P04436 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.56■□□□□ 0.56
P04436 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.56■□□□□ 0.56
P04436 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.56■□□□□ 0.56
P04436 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.56■□□□□ 0.56
P04436 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.56■□□□□ 0.56
P04436 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.56■□□□□ 0.56
P04436 AC026366.1-201ENST00000488803 879 ntBASIC18.56■□□□□ 0.56
P04436 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.56■□□□□ 0.56
P04436 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 ITM2C-210ENST00000620962 501 ntBASIC18.56■□□□□ 0.56
P04436 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.56■□□□□ 0.56
P04436 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 KRT8P36-201ENST00000489121 1440 ntBASIC18.56■□□□□ 0.56
P04436 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
P04436 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04436 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
P04436 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.55■□□□□ 0.56
P04436 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.55■□□□□ 0.56
P04436 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.55■□□□□ 0.56
P04436 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.55■□□□□ 0.56
P04436 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.55■□□□□ 0.56
P04436 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 PLK5-205ENST00000642079 1969 ntBASIC18.55■□□□□ 0.56
P04436 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04436 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.54■□□□□ 0.56
P04436 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.54■□□□□ 0.56
P04436 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
P04436 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
P04436 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04436 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.54■□□□□ 0.56
P04436 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.54■□□□□ 0.56
P04436 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms