Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.21■□□□□ 0.35
CD3DP04234 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.21■□□□□ 0.35
CD3DP04234 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CD3DP04234 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CD3DP04234 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CD3DP04234 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.21■□□□□ 0.35
CD3DP04234 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD3DP04234 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD3DP04234 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CD3DP04234 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CD3DP04234 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.2■□□□□ 0.34
CD3DP04234 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CD3DP04234 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CD3DP04234 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD3DP04234 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD3DP04234 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
CD3DP04234 AP004607.4-201ENST00000530158 1459 ntBASIC17.19■□□□□ 0.34
CD3DP04234 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD3DP04234 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CD3DP04234 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CD3DP04234 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CD3DP04234 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CD3DP04234 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
CD3DP04234 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.19■□□□□ 0.34
CD3DP04234 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.19■□□□□ 0.34
CD3DP04234 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.19■□□□□ 0.34
CD3DP04234 AC011298.3-201ENST00000615796 283 ntBASIC17.19■□□□□ 0.34
CD3DP04234 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD3DP04234 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD3DP04234 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.19■□□□□ 0.34
CD3DP04234 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.19■□□□□ 0.34
CD3DP04234 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD3DP04234 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CD3DP04234 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD3DP04234 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CD3DP04234 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
CD3DP04234 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CD3DP04234 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.18■□□□□ 0.34
CD3DP04234 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 AC093484.2-201ENST00000580996 2166 ntBASIC17.18■□□□□ 0.34
CD3DP04234 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CD3DP04234 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.18■□□□□ 0.34
CD3DP04234 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
CD3DP04234 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CD3DP04234 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD3DP04234 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
CD3DP04234 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms