Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE6O95741 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE6O95741 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE6O95741 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE6O95741 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE6O95741 AC128676.1-201ENST00000454392 318 ntBASIC19.91■□□□□ 0.78
CPNE6O95741 AC098590.1-201ENST00000468126 897 ntBASIC19.91■□□□□ 0.78
CPNE6O95741 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE6O95741 AC060766.5-201ENST00000590539 871 ntBASIC19.91■□□□□ 0.78
CPNE6O95741 HLA-B-256ENST00000639848 1089 ntBASIC19.91■□□□□ 0.78
CPNE6O95741 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE6O95741 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CPNE6O95741 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.9■□□□□ 0.78
CPNE6O95741 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.9■□□□□ 0.78
CPNE6O95741 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.9■□□□□ 0.78
CPNE6O95741 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
CPNE6O95741 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CPNE6O95741 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE6O95741 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CPNE6O95741 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPNE6O95741 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPNE6O95741 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CPNE6O95741 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CPNE6O95741 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE6O95741 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 GCSHP5-201ENST00000443090 522 ntBASIC19.89■□□□□ 0.77
CPNE6O95741 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 RPS2P52-201ENST00000469610 820 ntBASIC19.89■□□□□ 0.77
CPNE6O95741 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CPNE6O95741 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.89■□□□□ 0.77
CPNE6O95741 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.89■□□□□ 0.77
CPNE6O95741 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE6O95741 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE6O95741 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 AP006294.2-201ENST00000641667 209 ntBASIC19.89■□□□□ 0.77
CPNE6O95741 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE6O95741 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CPNE6O95741 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.88■□□□□ 0.77
CPNE6O95741 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 FEM1AP4-201ENST00000443167 1987 ntBASIC19.88■□□□□ 0.77
CPNE6O95741 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE6O95741 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE6O95741 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE6O95741 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE6O95741 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
CPNE6O95741 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE6O95741 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE6O95741 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
CPNE6O95741 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE6O95741 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CPNE6O95741 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CPNE6O95741 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.87■□□□□ 0.77
CPNE6O95741 Z98882.1-201ENST00000622160 2253 ntBASIC19.87■□□□□ 0.77
CPNE6O95741 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE6O95741 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms