Protein–RNA interactions for Protein: O75449

KATNA1, Katanin p60 ATPase-containing subunit A1, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1O75449 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.02■□□□□ 0.8
KATNA1O75449 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.8
KATNA1O75449 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.02■□□□□ 0.8
KATNA1O75449 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.02■□□□□ 0.8
KATNA1O75449 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.02■□□□□ 0.8
KATNA1O75449 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.02■□□□□ 0.8
KATNA1O75449 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KATNA1O75449 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.02■□□□□ 0.8
KATNA1O75449 AP005212.1-201ENST00000581547 1997 ntBASIC20.02■□□□□ 0.8
KATNA1O75449 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.02■□□□□ 0.79
KATNA1O75449 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KATNA1O75449 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.02■□□□□ 0.79
KATNA1O75449 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KATNA1O75449 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
KATNA1O75449 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.02■□□□□ 0.79
KATNA1O75449 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
KATNA1O75449 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 GABARAPL3-202ENST00000624044 1851 ntBASIC20.01■□□□□ 0.79
KATNA1O75449 AC027702.1-201ENST00000563810 1770 ntBASIC20.01■□□□□ 0.79
KATNA1O75449 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
KATNA1O75449 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 GUSBP6-202ENST00000438529 1198 ntBASIC20.01■□□□□ 0.79
KATNA1O75449 CNN2P6-201ENST00000439038 900 ntBASIC20.01■□□□□ 0.79
KATNA1O75449 TSPY20P-201ENST00000450910 630 ntBASIC20.01■□□□□ 0.79
KATNA1O75449 KRT18P6-201ENST00000555540 1265 ntBASIC20.01■□□□□ 0.79
KATNA1O75449 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.01■□□□□ 0.79
KATNA1O75449 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.01■□□□□ 0.79
KATNA1O75449 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KATNA1O75449 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
KATNA1O75449 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.01■□□□□ 0.79
KATNA1O75449 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.01■□□□□ 0.79
KATNA1O75449 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KATNA1O75449 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
KATNA1O75449 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20■□□□□ 0.79
KATNA1O75449 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KATNA1O75449 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KATNA1O75449 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KATNA1O75449 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20■□□□□ 0.79
KATNA1O75449 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20■□□□□ 0.79
KATNA1O75449 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20■□□□□ 0.79
KATNA1O75449 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20■□□□□ 0.79
KATNA1O75449 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20■□□□□ 0.79
KATNA1O75449 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
KATNA1O75449 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KATNA1O75449 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.99■□□□□ 0.79
KATNA1O75449 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.99■□□□□ 0.79
KATNA1O75449 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.99■□□□□ 0.79
KATNA1O75449 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KATNA1O75449 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.99■□□□□ 0.79
KATNA1O75449 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
KATNA1O75449 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
KATNA1O75449 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
KATNA1O75449 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 AL391422.3-201ENST00000603791 2761 ntBASIC19.99■□□□□ 0.79
KATNA1O75449 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.99■□□□□ 0.79
KATNA1O75449 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.99■□□□□ 0.79
KATNA1O75449 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KATNA1O75449 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KATNA1O75449 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KATNA1O75449 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KATNA1O75449 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms