Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL138966.2-201ENST00000621997 464 ntBASIC9.16□□□□□ -0.94
USH2AO75445 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC9.16□□□□□ -0.94
USH2AO75445 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
USH2AO75445 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC9.16□□□□□ -0.94
USH2AO75445 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC9.16□□□□□ -0.94
USH2AO75445 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC9.16□□□□□ -0.94
USH2AO75445 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC9.16□□□□□ -0.94
USH2AO75445 RN7SL510P-201ENST00000581311 263 ntBASIC9.16□□□□□ -0.94
USH2AO75445 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC9.16□□□□□ -0.94
USH2AO75445 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
USH2AO75445 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC9.16□□□□□ -0.94
USH2AO75445 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC9.16□□□□□ -0.94
USH2AO75445 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
USH2AO75445 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USH2AO75445 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC9.15□□□□□ -0.94
USH2AO75445 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
USH2AO75445 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.15□□□□□ -0.94
USH2AO75445 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
USH2AO75445 NFE2L3P1-201ENST00000588207 1959 ntBASIC9.15□□□□□ -0.94
USH2AO75445 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC9.15□□□□□ -0.94
USH2AO75445 TSPY21P-201ENST00000433481 731 ntBASIC9.15□□□□□ -0.94
USH2AO75445 TSPY23P-201ENST00000440136 739 ntBASIC9.15□□□□□ -0.94
USH2AO75445 GPX4-207ENST00000589115 812 ntTSL 2 BASIC9.15□□□□□ -0.94
USH2AO75445 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC9.15□□□□□ -0.94
USH2AO75445 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 AC092119.3-201ENST00000612618 583 ntBASIC9.15□□□□□ -0.94
USH2AO75445 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 AC092053.2-201ENST00000640557 1818 ntBASIC9.15□□□□□ -0.94
USH2AO75445 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC9.15□□□□□ -0.94
USH2AO75445 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC9.15□□□□□ -0.94
USH2AO75445 CKBP1-201ENST00000565489 1086 ntBASIC9.15□□□□□ -0.94
USH2AO75445 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC9.15□□□□□ -0.94
USH2AO75445 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
USH2AO75445 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
USH2AO75445 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
USH2AO75445 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
USH2AO75445 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
USH2AO75445 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC9.15□□□□□ -0.95
USH2AO75445 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
USH2AO75445 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
USH2AO75445 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC9.15□□□□□ -0.95
USH2AO75445 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC9.15□□□□□ -0.95
USH2AO75445 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC9.15□□□□□ -0.95
USH2AO75445 AC007322.3-201ENST00000426526 701 ntBASIC9.15□□□□□ -0.95
USH2AO75445 AC009078.2-202ENST00000463353 338 ntBASIC9.15□□□□□ -0.95
USH2AO75445 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC9.15□□□□□ -0.95
USH2AO75445 YBX1P2-201ENST00000489612 999 ntBASIC9.15□□□□□ -0.95
USH2AO75445 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
USH2AO75445 IER3-202ENST00000376377 1350 ntBASIC9.14□□□□□ -0.95
USH2AO75445 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC9.14□□□□□ -0.95
USH2AO75445 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC9.14□□□□□ -0.95
USH2AO75445 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC9.14□□□□□ -0.95
USH2AO75445 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC9.14□□□□□ -0.95
USH2AO75445 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 AL671277.2-201ENST00000458060 996 ntBASIC9.14□□□□□ -0.95
USH2AO75445 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC9.14□□□□□ -0.95
USH2AO75445 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC9.14□□□□□ -0.95
USH2AO75445 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
USH2AO75445 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 CD70-202ENST00000423145 881 ntTSL 2 BASIC9.14□□□□□ -0.95
USH2AO75445 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC9.14□□□□□ -0.95
USH2AO75445 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC9.14□□□□□ -0.95
USH2AO75445 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC9.14□□□□□ -0.95
USH2AO75445 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC9.14□□□□□ -0.95
USH2AO75445 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
USH2AO75445 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
USH2AO75445 TSPY14P-201ENST00000303979 915 ntBASIC9.14□□□□□ -0.95
USH2AO75445 RER1-204ENST00000378518 522 ntTSL 3 BASIC9.14□□□□□ -0.95
USH2AO75445 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
USH2AO75445 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC9.14□□□□□ -0.95
USH2AO75445 KRT17P6-201ENST00000453795 1220 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms